Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS16520

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
3,592,669	+				+2.0
3,592,754	-				-3.1
3,592,902	+				-1.9
3,592,902	+				-1.2
3,592,902	+				-1.8
3,592,902	+				-1.0
3,592,919	+				-2.2
3,592,920	-				-1.2
3,592,920	-				-0.5
3,592,967	+				+0.4
3,592,978	+				-2.0
3,593,017	+				-1.1
3,593,017	+				-1.2
3,593,141	+				-1.0
3,593,142	-				+0.8
3,593,142	-				-1.0
3,593,164	+				-2.1
3,593,164	+				-2.8
3,593,164	+				-2.0
3,593,165	-				-2.5
3,593,165	-				-2.2
3,593,165	-				-2.0
3,593,165	-				-1.7
3,593,507	-		ABIE51_RS16520	0.44	-0.9
3,593,759	+		ABIE51_RS16520	0.71	-2.6
3,593,759	+		ABIE51_RS16520	0.71	-1.0
3,593,759	+		ABIE51_RS16520	0.71	-1.5
3,593,760	-		ABIE51_RS16520	0.72	-1.6
3,593,760	-		ABIE51_RS16520	0.72	-0.6
3,593,869	+		ABIE51_RS16520	0.84	-0.4
3,593,869	+		ABIE51_RS16520	0.84	-0.7
3,593,869	+		ABIE51_RS16520	0.84	-1.7
3,593,870	-		ABIE51_RS16520	0.84	-1.4
3,593,870	-		ABIE51_RS16520	0.84	-1.4
3,593,870	-		ABIE51_RS16520	0.84	-2.1
3,593,870	-		ABIE51_RS16520	0.84	-2.6
3,593,870	-		ABIE51_RS16520	0.84	-0.8
3,593,870	-		ABIE51_RS16520	0.84	-0.3
3,593,905	+		ABIE51_RS16520	0.88	-1.6
3,593,905	+		ABIE51_RS16520	0.88	-1.4
3,593,905	+		ABIE51_RS16520	0.88	-0.9
3,593,905	+		ABIE51_RS16520	0.88	+0.0
3,593,905	+		ABIE51_RS16520	0.88	-1.3
3,593,905	+		ABIE51_RS16520	0.88	-1.5
3,593,905	+		ABIE51_RS16520	0.88	-1.7
3,593,905	+		ABIE51_RS16520	0.88	+0.0
3,593,906	-		ABIE51_RS16520	0.88	-1.2
3,593,906	-		ABIE51_RS16520	0.88	-2.0
3,593,906	-		ABIE51_RS16520	0.88	-1.0
3,593,906	-		ABIE51_RS16520	0.88	-0.2
3,593,906	-		ABIE51_RS16520	0.88	-1.8
3,593,936	+				-0.7
3,593,936	+				+0.0
3,593,937	-				-0.9
3,593,937	-				-2.0
3,593,980	+				-0.9
3,593,980	+				-2.0
3,593,980	+				-1.1
3,593,981	-				-1.7
3,593,981	-				-0.4
3,593,981	-				-0.6
3,594,385	+		ABIE51_RS16525	0.72	+0.1
3,594,386	-		ABIE51_RS16525	0.72	-0.2
3,594,491	+				-1.6
3,594,575	+				+1.2
3,594,575	+				-0.4
3,594,575	+				+0.0
3,594,576	-				+0.6
3,594,631	+		ABIE51_RS16530	0.41	+0.0
3,594,631	+		ABIE51_RS16530	0.41	+0.0
3,594,632	-		ABIE51_RS16530	0.42	-0.9
3,594,655	+		ABIE51_RS16530	0.73	-0.9
3,594,655	+		ABIE51_RS16530	0.73	-0.1
3,594,655	+		ABIE51_RS16530	0.73	+0.4
3,594,655	+		ABIE51_RS16530	0.73	-0.9
3,594,655	+		ABIE51_RS16530	0.73	+0.0
3,594,656	-		ABIE51_RS16530	0.74	+0.4
3,594,656	-		ABIE51_RS16530	0.74	+0.2
3,594,656	-		ABIE51_RS16530	0.74	-0.3
3,594,666	+		ABIE51_RS16530	0.88	-0.2
3,594,666	+		ABIE51_RS16530	0.88	+0.0
3,594,666	+		ABIE51_RS16530	0.88	+0.2
3,594,666	+		ABIE51_RS16530	0.88	+0.6
3,594,666	+		ABIE51_RS16530	0.88	+0.1
3,594,666	+		ABIE51_RS16530	0.88	+0.1
3,594,667	-				+0.0
3,594,667	-				+0.1
3,594,689	+				-0.6
3,594,689	+				-0.3
3,594,689	+				+0.0
3,594,689	+				-0.3
3,594,689	+				-0.4
3,594,689	+				-0.1
3,594,689	+				+0.6
3,594,689	+				+0.3
3,594,689	+				+0.5
3,594,689	+				+1.2
3,594,689	+				-0.2
3,594,690	-				-0.5
3,594,690	-				-0.9
3,594,690	-				-0.1
3,594,690	-				+0.1
3,594,690	-				-0.0
3,594,690	-				-0.2
3,594,690	-				-0.3
3,594,690	-				-0.3
3,594,773	+				-0.4
3,594,773	+				+0.4
3,594,773	+				-0.3
3,594,774	-				-0.1
3,594,774	-				-0.7
3,594,774	-				-0.0
3,594,774	-				+0.2
3,594,774	-				-0.6
3,594,774	-				-0.8
3,594,903	-				-1.3
3,594,903	-				-0.7
3,594,915	-				-0.3
3,594,915	-				-0.3
3,594,915	-				-0.8
3,594,935	+				+0.1
3,594,936	-				-0.0
3,594,936	-				+0.1
3,594,936	-				+0.4
3,595,007	+		ABIE51_RS16535	0.13	+0.8
3,595,007	+		ABIE51_RS16535	0.13	-0.6
3,595,007	+		ABIE51_RS16535	0.13	+1.2
3,595,007	+		ABIE51_RS16535	0.13	-0.5
3,595,007	+		ABIE51_RS16535	0.13	-0.2
3,595,007	+		ABIE51_RS16535	0.13	-0.7
3,595,007	+		ABIE51_RS16535	0.13	-0.1
3,595,008	-		ABIE51_RS16535	0.13	-1.6
3,595,008	-		ABIE51_RS16535	0.13	-0.2
3,595,008	-		ABIE51_RS16535	0.13	+0.5
3,595,008	-		ABIE51_RS16535	0.13	+2.3
3,595,008	-		ABIE51_RS16535	0.13	+0.8
3,595,008	-		ABIE51_RS16535	0.13	-0.7
3,595,008	-		ABIE51_RS16535	0.13	-1.0