Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS17770

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
3,883,077	+				+0.2
3,883,077	+				-0.1
3,883,077	+				+0.6
3,883,077	+				+0.2
3,883,077	+				-1.1
3,883,077	+				-0.6
3,883,077	+				-0.0
3,883,078	-				+0.4
3,883,078	-				-0.4
3,883,078	-				+0.1
3,883,189	-		ABIE51_RS17765	0.22	-0.1
3,883,301	-		ABIE51_RS17765	0.45	-0.2
3,883,432	+		ABIE51_RS17765	0.72	-0.6
3,883,435	+		ABIE51_RS17765	0.72	+0.2
3,883,435	+		ABIE51_RS17765	0.72	-0.9
3,883,436	-		ABIE51_RS17765	0.72	+0.5
3,883,436	-		ABIE51_RS17765	0.72	-0.1
3,883,495	+		ABIE51_RS17765	0.84	+0.0
3,883,495	+		ABIE51_RS17765	0.84	+0.7
3,883,495	+		ABIE51_RS17765	0.84	-0.1
3,883,496	-		ABIE51_RS17765	0.84	+0.0
3,883,546	+				-1.1
3,883,669	+				+0.0
3,883,669	+				-0.3
3,884,024	+		ABIE51_RS17770	0.24	-1.7
3,884,069	+		ABIE51_RS17770	0.28	-2.1
3,884,105	+		ABIE51_RS17770	0.31	-2.1
3,884,105	+		ABIE51_RS17770	0.31	-2.7
3,884,105	+		ABIE51_RS17770	0.31	-1.1
3,884,106	-		ABIE51_RS17770	0.31	-1.1
3,884,403	-		ABIE51_RS17770	0.54	-2.1
3,884,403	-		ABIE51_RS17770	0.54	-2.9
3,884,564	+		ABIE51_RS17770	0.66	-3.3
3,884,564	+		ABIE51_RS17770	0.66	-1.1
3,884,564	+		ABIE51_RS17770	0.66	-3.3
3,884,565	-		ABIE51_RS17770	0.66	-2.4
3,884,565	-		ABIE51_RS17770	0.66	-1.7
3,884,906	+				-1.1
3,884,906	+				-2.4
3,884,906	+				-1.7
3,884,923	+				-0.1
3,884,923	+				-3.3
3,884,923	+				-2.4
3,885,136	-				-1.3
3,885,241	+		ABIE51_RS17775	0.30	+1.2
3,885,241	+		ABIE51_RS17775	0.30	+0.9
3,885,241	+		ABIE51_RS17775	0.30	+0.8
3,885,241	+		ABIE51_RS17775	0.30	-0.4
3,885,241	+		ABIE51_RS17775	0.30	+0.2
3,885,242	-		ABIE51_RS17775	0.30	-0.9
3,885,242	-		ABIE51_RS17775	0.30	-0.2
3,885,358	+		ABIE51_RS17775	0.73	+0.4
3,885,359	-		ABIE51_RS17775	0.73	-0.7
3,885,370	+		ABIE51_RS17775	0.77	+1.1
3,885,465	+				+0.3
3,885,466	-				+0.2