Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS12685

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,734,551	-		ABIE51_RS12675	0.61	-2.4
2,734,623	+		ABIE51_RS12675	0.69	+0.2
2,734,623	+		ABIE51_RS12675	0.69	+0.3
2,734,704	+		ABIE51_RS12675	0.77	-5.0
2,734,704	+		ABIE51_RS12675	0.77	-2.8
2,734,704	+		ABIE51_RS12675	0.77	-1.5
2,734,704	+		ABIE51_RS12675	0.77	-4.0
2,734,704	+		ABIE51_RS12675	0.77	-3.1
2,734,705	-		ABIE51_RS12675	0.77	-0.6
2,734,887	+				-1.3
2,734,888	-				+0.5
2,734,973	-				-0.4
2,734,973	-				+1.1
2,734,973	-				-0.6
2,735,284	+				+0.6
2,735,285	-				-1.3
2,735,285	-				-1.8
2,735,349	-				-1.6
2,735,357	-				-2.8
2,735,360	+				-1.3
2,735,360	+				-0.7
2,735,360	+				-0.9
2,735,360	+				-0.7
2,735,361	-				-2.1
2,735,361	-				-0.6
2,735,361	-				-1.9
2,735,361	-				-0.8
2,735,361	-				-1.6
2,735,400	+				+0.1
2,735,401	-				+0.3
2,735,447	+				+0.1
2,735,447	+				-1.5
2,735,448	-				-2.6
2,735,448	-				-1.0
2,736,062	+		ABIE51_RS12685	0.57	-2.0
2,736,062	+		ABIE51_RS12685	0.57	-0.5
2,736,068	+		ABIE51_RS12685	0.57	-1.7
2,736,069	-		ABIE51_RS12685	0.57	-2.4
2,736,339	-		ABIE51_RS12685	0.78	-3.7
2,736,656	+				+2.1
2,736,657	-				+0.2
2,736,702	-				+0.0
2,736,702	-				+0.5
2,736,734	+		ABIE51_RS12690	0.18	+0.0
2,736,735	-		ABIE51_RS12690	0.19	+0.0
2,736,837	-		ABIE51_RS12690	0.53	+0.9
2,736,855	+		ABIE51_RS12690	0.59	+0.2
2,736,855	+		ABIE51_RS12690	0.59	+0.9
2,736,856	-		ABIE51_RS12690	0.59	-0.0
2,737,129	-				-0.8
2,737,129	-				+0.5
2,737,129	-				-0.4
2,737,602	+		ABIE51_RS12695	0.42	-1.2
2,737,603	-		ABIE51_RS12695	0.42	-0.3
2,737,603	-		ABIE51_RS12695	0.42	-0.4