Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS11790

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,548,393	+				+0.9
2,548,393	+				+0.4
2,548,393	+				+0.3
2,548,393	+				+0.5
2,548,393	+				+0.4
2,548,393	+				+0.4
2,548,393	+				+0.3
2,548,393	+				+0.2
2,548,394	-				-0.5
2,548,394	-				+0.1
2,548,394	-				-0.5
2,548,394	-				-0.1
2,548,394	-				+0.2
2,548,394	-				+0.4
2,548,436	+				+0.4
2,548,436	+				+0.4
2,548,436	+				-0.2
2,548,436	+				+1.0
2,548,436	+				-0.1
2,548,436	+				+0.7
2,548,436	+				+0.3
2,548,437	-				+0.4
2,548,437	-				+0.9
2,548,437	-				+0.5
2,548,437	-				+0.3
2,548,790	+		ABIE51_RS11785	0.63	-1.2
2,548,999	-				-0.5
2,548,999	-				-0.4
2,548,999	-				+0.4
2,549,013	+				-0.0
2,549,013	+				+0.9
2,549,013	+				+0.1
2,549,013	+				+0.2
2,549,014	-				-0.3
2,549,014	-				-0.1
2,549,018	+				-0.5
2,549,018	+				+0.3
2,549,019	-				-1.8
2,549,019	-				-0.6
2,549,286	+		ABIE51_RS11790	0.47	-3.7
2,549,286	+		ABIE51_RS11790	0.47	-2.0
2,549,286	+		ABIE51_RS11790	0.47	-3.1
2,549,286	+		ABIE51_RS11790	0.47	-2.1
2,549,286	+		ABIE51_RS11790	0.47	-0.2
2,549,286	+		ABIE51_RS11790	0.47	-2.5
2,549,286	+		ABIE51_RS11790	0.47	-3.0
2,549,286	+		ABIE51_RS11790	0.47	-2.4
2,549,286	+		ABIE51_RS11790	0.47	-2.2
2,549,286	+		ABIE51_RS11790	0.47	-1.2
2,549,286	+		ABIE51_RS11790	0.47	-2.4
2,549,286	+		ABIE51_RS11790	0.47	-3.1
2,549,287	-		ABIE51_RS11790	0.48	-2.4
2,549,287	-		ABIE51_RS11790	0.48	-2.2
2,549,287	-		ABIE51_RS11790	0.48	-3.4
2,549,287	-		ABIE51_RS11790	0.48	-2.3
2,549,287	-		ABIE51_RS11790	0.48	-4.5
2,549,287	-		ABIE51_RS11790	0.48	-2.5
2,549,287	-		ABIE51_RS11790	0.48	-3.4
2,549,287	-		ABIE51_RS11790	0.48	-1.2
2,549,289	+		ABIE51_RS11790	0.48	-2.7
2,549,289	+		ABIE51_RS11790	0.48	-1.2
2,549,289	+		ABIE51_RS11790	0.48	-2.5
2,549,289	+		ABIE51_RS11790	0.48	-0.8
2,549,289	+		ABIE51_RS11790	0.48	-3.8
2,549,289	+		ABIE51_RS11790	0.48	-1.2
2,549,289	+		ABIE51_RS11790	0.48	-3.0
2,549,289	+		ABIE51_RS11790	0.48	-1.8
2,549,289	+		ABIE51_RS11790	0.48	-2.7
2,549,290	-		ABIE51_RS11790	0.49	-1.2
2,549,290	-		ABIE51_RS11790	0.49	-2.7
2,549,290	-		ABIE51_RS11790	0.49	-2.7
2,549,290	-		ABIE51_RS11790	0.49	-1.5
2,549,367	+		ABIE51_RS11790	0.71	-1.8
2,549,367	+		ABIE51_RS11790	0.71	-2.0
2,549,367	+		ABIE51_RS11790	0.71	-2.3
2,549,367	+		ABIE51_RS11790	0.71	-1.2
2,549,367	+		ABIE51_RS11790	0.71	-1.8
2,549,367	+		ABIE51_RS11790	0.71	-3.7
2,549,367	+		ABIE51_RS11790	0.71	-2.2
2,549,367	+		ABIE51_RS11790	0.71	-3.2
2,549,368	-		ABIE51_RS11790	0.71	-2.4
2,549,368	-		ABIE51_RS11790	0.71	-2.5
2,549,368	-		ABIE51_RS11790	0.71	-2.0
2,549,368	-		ABIE51_RS11790	0.71	-1.8
2,549,368	-		ABIE51_RS11790	0.71	-1.8
2,549,368	-		ABIE51_RS11790	0.71	-2.8
2,549,368	-		ABIE51_RS11790	0.71	-2.5
2,549,973	+				-0.1
2,549,973	+				+0.9
2,549,974	-				+0.4
2,549,974	-				+0.7
2,549,974	-				+0.3
2,549,974	-				+1.8
2,550,081	+		ABIE51_RS11800	0.18	+1.4
2,550,081	+		ABIE51_RS11800	0.18	+0.7
2,550,081	+		ABIE51_RS11800	0.18	+1.2
2,550,081	+		ABIE51_RS11800	0.18	+0.2
2,550,081	+		ABIE51_RS11800	0.18	+0.9
2,550,081	+		ABIE51_RS11800	0.18	+1.0
2,550,082	-		ABIE51_RS11800	0.18	+1.2
2,550,082	-		ABIE51_RS11800	0.18	+0.8
2,550,082	-		ABIE51_RS11800	0.18	+0.4
2,550,082	-		ABIE51_RS11800	0.18	+0.0
2,550,082	-		ABIE51_RS11800	0.18	+0.5
2,550,171	+		ABIE51_RS11800	0.28	+1.1
2,550,171	+		ABIE51_RS11800	0.28	+0.6
2,550,172	-		ABIE51_RS11800	0.28	+1.1
2,550,172	-		ABIE51_RS11800	0.28	+0.4
2,550,172	-		ABIE51_RS11800	0.28	+0.6
2,550,172	-		ABIE51_RS11800	0.28	+1.0
2,550,172	-		ABIE51_RS11800	0.28	+0.2
2,550,336	+		ABIE51_RS11800	0.46	+0.4
2,550,336	+		ABIE51_RS11800	0.46	-1.1
2,550,336	+		ABIE51_RS11800	0.46	+1.2
2,550,337	-		ABIE51_RS11800	0.46	+0.7
2,550,337	-		ABIE51_RS11800	0.46	+0.8
2,550,427	+		ABIE51_RS11800	0.56	+0.9
2,550,427	+		ABIE51_RS11800	0.56	+0.4
2,550,427	+		ABIE51_RS11800	0.56	+0.1
2,550,428	-		ABIE51_RS11800	0.56	+1.1
2,550,428	-		ABIE51_RS11800	0.56	+0.5
2,550,428	-		ABIE51_RS11800	0.56	+0.6
2,550,428	-		ABIE51_RS11800	0.56	+0.2