Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS11515

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,487,840	+		ABIE51_RS11510	0.16	+0.1
2,487,890	+		ABIE51_RS11510	0.20	-1.7
2,487,926	+		ABIE51_RS11510	0.23	+1.4
2,487,927	-		ABIE51_RS11510	0.23	-2.2
2,488,040	+		ABIE51_RS11510	0.33	-1.3
2,488,040	+		ABIE51_RS11510	0.33	-2.0
2,488,040	+		ABIE51_RS11510	0.33	-1.7
2,488,041	-		ABIE51_RS11510	0.34	-0.8
2,488,093	+		ABIE51_RS11510	0.38	-1.7
2,488,093	+		ABIE51_RS11510	0.38	-0.2
2,488,094	-		ABIE51_RS11510	0.38	-2.5
2,488,094	-		ABIE51_RS11510	0.38	-1.3
2,488,094	-		ABIE51_RS11510	0.38	-1.8
2,488,094	-		ABIE51_RS11510	0.38	-1.8
2,488,112	+		ABIE51_RS11510	0.40	-1.8
2,488,112	+		ABIE51_RS11510	0.40	-1.6
2,488,112	+		ABIE51_RS11510	0.40	-2.8
2,488,112	+		ABIE51_RS11510	0.40	-1.2
2,488,113	-		ABIE51_RS11510	0.40	-1.6
2,488,113	-		ABIE51_RS11510	0.40	-1.3
2,488,113	-		ABIE51_RS11510	0.40	-2.3
2,488,113	-		ABIE51_RS11510	0.40	-1.3
2,488,113	-		ABIE51_RS11510	0.40	-1.9
2,488,113	-		ABIE51_RS11510	0.40	-3.0
2,488,113	-		ABIE51_RS11510	0.40	-1.7
2,488,113	-		ABIE51_RS11510	0.40	-2.2
2,488,293	-		ABIE51_RS11510	0.56	-2.8
2,488,321	+		ABIE51_RS11510	0.58	-1.5
2,488,321	+		ABIE51_RS11510	0.58	-1.5
2,488,321	+		ABIE51_RS11510	0.58	-2.4
2,488,321	+		ABIE51_RS11510	0.58	-2.2
2,488,322	-		ABIE51_RS11510	0.59	-1.6
2,488,364	+		ABIE51_RS11510	0.62	+0.8
2,488,364	+		ABIE51_RS11510	0.62	-1.9
2,488,365	-		ABIE51_RS11510	0.62	-1.8
2,488,365	-		ABIE51_RS11510	0.62	-1.2
2,488,365	-		ABIE51_RS11510	0.62	-2.6
2,488,365	-		ABIE51_RS11510	0.62	-1.8
2,488,433	+		ABIE51_RS11510	0.68	-1.7
2,488,433	+		ABIE51_RS11510	0.68	-0.4
2,488,434	-		ABIE51_RS11510	0.69	-1.0
2,488,434	-		ABIE51_RS11510	0.69	-2.8
2,488,434	-		ABIE51_RS11510	0.69	-2.8
2,488,434	-		ABIE51_RS11510	0.69	-2.3
2,488,434	-		ABIE51_RS11510	0.69	-1.7
2,488,469	+		ABIE51_RS11510	0.72	-1.9
2,488,469	+		ABIE51_RS11510	0.72	-0.8
2,488,470	-		ABIE51_RS11510	0.72	-2.8
2,488,470	-		ABIE51_RS11510	0.72	-2.4
2,488,470	-		ABIE51_RS11510	0.72	-2.2
2,488,470	-		ABIE51_RS11510	0.72	-0.6
2,488,470	-		ABIE51_RS11510	0.72	-1.6
2,488,470	-		ABIE51_RS11510	0.72	-2.1
2,488,470	-		ABIE51_RS11510	0.72	-1.2
2,488,700	+				-1.7
2,488,701	-				-1.6
2,488,701	-				-1.8
2,488,853	+				-2.1
2,488,853	+				-1.9
2,488,853	+				-2.8
2,488,854	-				-1.8
2,488,951	+		ABIE51_RS11515	0.25	-2.6
2,488,952	-		ABIE51_RS11515	0.25	-2.5
2,488,952	-		ABIE51_RS11515	0.25	-1.6
2,488,999	+		ABIE51_RS11515	0.33	-1.8
2,488,999	+		ABIE51_RS11515	0.33	-2.3
2,489,245	+		ABIE51_RS11515	0.74	-1.9
2,489,245	+		ABIE51_RS11515	0.74	-2.9
2,489,245	+		ABIE51_RS11515	0.74	-1.9
2,489,245	+		ABIE51_RS11515	0.74	-0.6
2,489,505	+				+0.9
2,489,505	+				-0.3
2,489,506	-				-0.3
2,489,506	-				+0.1
2,489,506	-				+0.8
2,489,588	+				-0.3
2,489,589	-				-0.6
2,489,595	+				-0.6
2,489,732	+				+0.5
2,489,733	-				+0.0
2,489,733	-				+1.0
2,489,773	+				+0.5
2,489,831	-				+0.8
2,489,857	+				+1.1
2,489,857	+				+2.0
2,489,858	-				+0.3
2,489,858	-				+1.2
2,489,858	-				+1.8
2,489,858	-				-1.2
2,489,858	-				+0.1
2,489,858	-				+1.4
2,489,858	-				+2.0
2,489,863	+				+2.2
2,489,863	+				+2.9
2,489,863	+				+1.8
2,489,864	-				+1.1
2,489,908	+				+1.4
2,489,908	+				+2.0
2,489,908	+				+1.3
2,489,908	+				+1.0
2,489,908	+				+0.9
2,489,908	+				+1.1
2,489,908	+				+1.8
2,489,908	+				+0.4
2,489,908	+				+1.2
2,489,908	+				+1.9
2,489,908	+				+1.5
2,489,909	-				+0.6
2,489,909	-				+1.6
2,489,909	-				+1.6
2,489,909	-				+2.0
2,489,909	-				+2.2
2,489,909	-				+2.3
2,489,974	+				+1.7
2,490,124	+		ABIE51_RS11520	0.13	+1.0
2,490,124	+		ABIE51_RS11520	0.13	+2.6
2,490,125	-		ABIE51_RS11520	0.13	+1.1
2,490,386	-		ABIE51_RS11520	0.23	+2.1