Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS11110

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,409,122	+		ABIE51_RS11100	0.38	-0.1
2,409,122	+		ABIE51_RS11100	0.38	-0.4
2,409,302	+		ABIE51_RS11100	0.59	-0.0
2,409,303	-		ABIE51_RS11100	0.60	-0.3
2,409,308	+		ABIE51_RS11100	0.60	+0.2
2,409,309	-		ABIE51_RS11100	0.60	+0.4
2,409,392	+		ABIE51_RS11100	0.70	-0.4
2,409,393	-		ABIE51_RS11100	0.71	-1.2
2,409,739	+				-0.3
2,409,739	+				+0.2
2,409,754	-				+0.1
2,409,761	+				+0.1
2,409,761	+				-0.2
2,409,761	+				-0.2
2,409,762	-				-0.4
2,409,762	-				-0.2
2,409,762	-				+0.4
2,409,912	+		ABIE51_RS11105	0.59	-0.0
2,409,912	+		ABIE51_RS11105	0.59	-0.3
2,409,912	+		ABIE51_RS11105	0.59	+0.1
2,410,037	+				-0.4
2,410,037	+				-0.2
2,410,037	+				-0.5
2,410,038	-				-0.1
2,410,038	-				-0.2
2,410,039	+				+0.2
2,410,039	+				-1.0
2,410,039	+				+0.5
2,410,039	+				+0.1
2,410,040	-				-0.3
2,410,041	+				-0.1
2,410,041	+				-0.1
2,410,041	+				+0.2
2,410,041	+				+0.6
2,410,041	+				+0.1
2,410,042	-				+0.1
2,410,042	-				+0.7
2,410,042	-				+0.3
2,410,049	+				+0.7
2,410,050	-				-0.1
2,410,050	-				-0.2
2,410,052	-				+0.4
2,410,333	+		ABIE51_RS11110	0.34	-3.8
2,410,516	+		ABIE51_RS11110	0.57	-4.3
2,410,517	-		ABIE51_RS11110	0.58	-0.2
2,410,517	-		ABIE51_RS11110	0.58	-4.8
2,410,590	-		ABIE51_RS11110	0.67	-2.7
2,410,590	-		ABIE51_RS11110	0.67	-4.9
2,410,590	-		ABIE51_RS11110	0.67	-3.0
2,410,642	+		ABIE51_RS11110	0.74	-4.3
2,410,817	-				-1.2
2,410,817	-				-0.6
2,411,382	-		ABIE51_RS11115	0.75	-2.4
2,411,382	-		ABIE51_RS11115	0.75	-2.7
2,411,529	+				-0.7
2,411,530	-				+0.4
2,411,630	+		ABIE51_RS11120	0.13	-1.8
2,411,630	+		ABIE51_RS11120	0.13	-2.4
2,411,632	+		ABIE51_RS11120	0.13	-3.6
2,411,633	-		ABIE51_RS11120	0.13	-0.2