Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS08725

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
1,848,671	+		ABIE51_RS08715	0.76	-5.4
1,848,671	+		ABIE51_RS08715	0.76	-3.0
1,848,671	+		ABIE51_RS08715	0.76	-4.4
1,848,671	+		ABIE51_RS08715	0.76	-4.0
1,848,671	+		ABIE51_RS08715	0.76	-2.8
1,848,671	+		ABIE51_RS08715	0.76	-2.2
1,848,671	+		ABIE51_RS08715	0.76	-5.8
1,848,671	+		ABIE51_RS08715	0.76	-3.0
1,848,671	+		ABIE51_RS08715	0.76	-3.2
1,848,671	+		ABIE51_RS08715	0.76	-5.1
1,848,672	-		ABIE51_RS08715	0.76	-3.5
1,848,672	-		ABIE51_RS08715	0.76	-2.2
1,848,672	-		ABIE51_RS08715	0.76	-3.0
1,848,672	-		ABIE51_RS08715	0.76	-4.1
1,848,672	-		ABIE51_RS08715	0.76	-1.2
1,848,672	-		ABIE51_RS08715	0.76	-3.5
1,848,701	+		ABIE51_RS08715	0.80	-1.8
1,848,702	-		ABIE51_RS08715	0.80	-3.3
1,848,806	+				-3.3
1,848,806	+				-1.8
1,848,806	+				-3.0
1,848,807	-				-3.8
1,848,807	-				-2.5
1,849,134	+		ABIE51_RS08720	0.23	-3.2
1,849,134	+		ABIE51_RS08720	0.23	-1.8
1,849,134	+		ABIE51_RS08720	0.23	-3.9
1,849,135	-		ABIE51_RS08720	0.23	-2.0
1,849,135	-		ABIE51_RS08720	0.23	-2.2
1,849,135	-		ABIE51_RS08720	0.23	-2.8
1,849,163	+		ABIE51_RS08720	0.27	-4.4
1,849,163	+		ABIE51_RS08720	0.27	-3.8
1,849,163	+		ABIE51_RS08720	0.27	-2.5
1,849,164	-		ABIE51_RS08720	0.27	-3.5
1,849,165	+		ABIE51_RS08720	0.27	-3.0
1,849,281	+		ABIE51_RS08720	0.44	-1.8
1,849,281	+		ABIE51_RS08720	0.44	-4.3
1,849,281	+		ABIE51_RS08720	0.44	-4.9
1,849,282	-		ABIE51_RS08720	0.44	-4.4
1,849,282	-		ABIE51_RS08720	0.44	-4.8
1,849,282	-		ABIE51_RS08720	0.44	-4.1
1,849,724	+				-2.5
1,849,724	+				-3.8
1,849,724	+				-4.4
1,849,724	+				-3.2
1,849,823	+		ABIE51_RS08725	0.24	-4.7
1,849,891	-		ABIE51_RS08725	0.35	-3.6
1,849,929	-		ABIE51_RS08725	0.40	-1.8
1,850,061	-		ABIE51_RS08725	0.61	-2.5
1,850,358	+				-1.0
1,850,359	-				+0.1
1,850,742	+		ABIE51_RS08730	0.68	-0.3
1,850,743	-		ABIE51_RS08730	0.68	-0.2
1,850,743	-		ABIE51_RS08730	0.68	+0.2
1,850,743	-		ABIE51_RS08730	0.68	+0.0
1,850,743	-		ABIE51_RS08730	0.68	+0.4
1,850,743	-		ABIE51_RS08730	0.68	-0.2
1,850,743	-		ABIE51_RS08730	0.68	+0.0
1,850,743	-		ABIE51_RS08730	0.68	-0.7
1,850,743	-		ABIE51_RS08730	0.68	+0.4
1,850,743	-		ABIE51_RS08730	0.68	-0.5
1,850,743	-		ABIE51_RS08730	0.68	+0.3
1,850,743	-		ABIE51_RS08730	0.68	-0.1
1,850,743	-		ABIE51_RS08730	0.68	-1.2
1,850,744	+		ABIE51_RS08730	0.68	+0.1
1,850,745	-		ABIE51_RS08730	0.69	-0.7
1,850,745	-		ABIE51_RS08730	0.69	+0.8
1,850,745	-		ABIE51_RS08730	0.69	-0.6
1,850,745	-		ABIE51_RS08730	0.69	-1.7
1,850,745	-		ABIE51_RS08730	0.69	-0.3
1,850,832	-		ABIE51_RS08730	0.87	-1.4
1,850,846	+				-0.8
1,850,847	-				-0.1
1,851,006	+				-1.0
1,851,006	+				+0.0
1,851,006	+				+0.1
1,851,006	+				+0.5
1,851,007	-				-0.6
1,851,007	-				-0.5
1,851,164	-		ABIE51_RS08735	0.10	-1.1
1,851,220	-		ABIE51_RS08735	0.15	+0.7
1,851,282	+		ABIE51_RS08735	0.20	+0.3