Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS06255

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
1,335,285	+		ABIE51_RS06250	0.53	-2.8
1,335,286	-		ABIE51_RS06250	0.53	-4.1
1,335,286	-		ABIE51_RS06250	0.53	-2.6
1,335,286	-		ABIE51_RS06250	0.53	-3.1
1,335,337	-		ABIE51_RS06250	0.57	-2.1
1,335,337	-		ABIE51_RS06250	0.57	-4.9
1,335,337	-		ABIE51_RS06250	0.57	-4.2
1,335,570	+		ABIE51_RS06250	0.76	-2.9
1,335,735	+		ABIE51_RS06250	0.89	-5.0
1,335,735	+		ABIE51_RS06250	0.89	-4.4
1,335,736	-		ABIE51_RS06250	0.89	-4.0
1,335,736	-		ABIE51_RS06250	0.89	-4.3
1,335,736	-		ABIE51_RS06250	0.89	-4.0
1,335,736	-		ABIE51_RS06250	0.89	-4.0
1,335,847	+				-1.6
1,335,847	+				-1.9
1,335,847	+				-1.5
1,335,847	+				-2.3
1,335,847	+				+0.2
1,335,848	-				-0.4
1,335,848	-				-1.1
1,335,878	+				-0.7
1,336,186	-		ABIE51_RS06255	0.18	-3.9
1,336,186	-		ABIE51_RS06255	0.18	-1.7
1,336,186	-		ABIE51_RS06255	0.18	-3.2
1,336,186	-		ABIE51_RS06255	0.18	-2.9
1,336,242	+		ABIE51_RS06255	0.22	-2.8
1,336,243	-		ABIE51_RS06255	0.22	-3.7
1,336,290	+		ABIE51_RS06255	0.26	-3.1
1,336,291	-		ABIE51_RS06255	0.26	-2.0
1,336,291	-		ABIE51_RS06255	0.26	-1.7
1,336,291	-		ABIE51_RS06255	0.26	-3.2
1,336,291	-		ABIE51_RS06255	0.26	-3.3
1,336,291	-		ABIE51_RS06255	0.26	-2.3
1,336,291	-		ABIE51_RS06255	0.26	-0.8
1,336,321	-		ABIE51_RS06255	0.28	-1.3
1,336,321	-		ABIE51_RS06255	0.28	-1.1
1,336,404	+		ABIE51_RS06255	0.34	-3.2
1,336,404	+		ABIE51_RS06255	0.34	-2.1
1,336,404	+		ABIE51_RS06255	0.34	-4.2
1,336,404	+		ABIE51_RS06255	0.34	-2.4
1,336,405	-		ABIE51_RS06255	0.34	-3.7
1,336,405	-		ABIE51_RS06255	0.34	-1.7
1,336,405	-		ABIE51_RS06255	0.34	-2.7
1,336,405	-		ABIE51_RS06255	0.34	-3.1
1,336,476	+		ABIE51_RS06255	0.40	-2.6
1,336,477	-		ABIE51_RS06255	0.40	-2.1
1,336,477	-		ABIE51_RS06255	0.40	-1.6
1,336,477	-		ABIE51_RS06255	0.40	-3.2
1,336,477	-		ABIE51_RS06255	0.40	-0.7
1,337,077	-		ABIE51_RS06255	0.84	-3.7
1,337,077	-		ABIE51_RS06255	0.84	-4.3
1,337,190	+				-2.9
1,337,190	+				-2.4
1,337,190	+				-1.6
1,337,191	-				-2.3
1,337,191	-				-2.1
1,337,516	+		ABIE51_RS06260	0.42	+0.4
1,337,516	+		ABIE51_RS06260	0.42	+0.0
1,337,517	-		ABIE51_RS06260	0.42	+0.3
1,337,517	-		ABIE51_RS06260	0.42	-0.2
1,337,630	+		ABIE51_RS06260	0.65	+0.7
1,337,795	+				-0.2
1,337,972	+		ABIE51_RS06265	0.11	-0.2
1,337,972	+		ABIE51_RS06265	0.11	+0.2
1,337,973	-		ABIE51_RS06265	0.11	-0.4
1,337,973	-		ABIE51_RS06265	0.11	+0.7
1,337,973	-		ABIE51_RS06265	0.11	+0.2
1,338,061	+		ABIE51_RS06265	0.16	+0.1
1,338,061	+		ABIE51_RS06265	0.16	+0.3
1,338,062	-		ABIE51_RS06265	0.16	-1.7
1,338,062	-		ABIE51_RS06265	0.16	-0.2
1,338,081	+		ABIE51_RS06265	0.18	-0.1