Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS04715

Experiment: Ying_AminoAcid20 rep B; time point 3

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE51_RS04710 and ABIE51_RS04715 overlap by 4 nucleotidesABIE51_RS04715 and ABIE51_RS04720 are separated by 74 nucleotides ABIE51_RS04710: ABIE51_RS04710 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 1,016,941 to 1,018,050 _RS04710 ABIE51_RS04715: ABIE51_RS04715 - cell division protein FtsL, at 1,018,047 to 1,018,316 _RS04715 ABIE51_RS04720: ABIE51_RS04720 - penicillin-binding transpeptidase domain-containing protein, at 1,018,391 to 1,020,133 _RS04720 Position (kb) 1018 1019Strain fitness (log2 ratio) -1 0 1at 1017.406 kb on + strand, within ABIE51_RS04710

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Per-strain Table

Position Strand Gene LocusTag Fraction Ying_AminoAcid20 rep B; time point 3
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1,017,406 + ABIE51_RS04710 0.42 -1.5

Or see this region's nucleotide sequence