Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS14045

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
3,040,674	+		ABIE51_RS14035	0.63	+0.3
3,040,674	+		ABIE51_RS14035	0.63	+0.2
3,040,674	+		ABIE51_RS14035	0.63	+0.3
3,040,674	+		ABIE51_RS14035	0.63	-1.2
3,040,675	-		ABIE51_RS14035	0.63	-0.7
3,040,675	-		ABIE51_RS14035	0.63	-0.5
3,040,675	-		ABIE51_RS14035	0.63	-0.0
3,040,675	-		ABIE51_RS14035	0.63	-0.8
3,040,834	+		ABIE51_RS14035	0.79	+0.1
3,040,834	+		ABIE51_RS14035	0.79	-0.8
3,040,835	-		ABIE51_RS14035	0.79	+0.5
3,041,085	+				-2.7
3,041,171	+		ABIE51_RS14040	0.23	-3.7
3,041,171	+		ABIE51_RS14040	0.23	-3.1
3,041,172	-		ABIE51_RS14040	0.23	-3.1
3,041,345	+		ABIE51_RS14040	0.64	-5.4
3,041,345	+		ABIE51_RS14040	0.64	-1.7
3,041,345	+		ABIE51_RS14040	0.64	-2.7
3,041,345	+		ABIE51_RS14040	0.64	-3.7
3,041,345	+		ABIE51_RS14040	0.64	-2.1
3,041,346	-		ABIE51_RS14040	0.64	-4.0
3,041,354	+		ABIE51_RS14040	0.66	-1.1
3,041,354	+		ABIE51_RS14040	0.66	-1.1
3,041,385	+		ABIE51_RS14040	0.73	-5.7
3,041,385	+		ABIE51_RS14040	0.73	-2.7
3,041,386	-		ABIE51_RS14040	0.73	-4.3
3,041,386	-		ABIE51_RS14040	0.73	-2.1
3,041,386	-		ABIE51_RS14040	0.73	-2.1
3,041,386	-		ABIE51_RS14040	0.73	-1.1
3,041,707	+		ABIE51_RS14045	0.58	-2.9
3,041,707	+		ABIE51_RS14045	0.58	-2.4
3,041,707	+		ABIE51_RS14045	0.58	-2.1
3,041,708	-		ABIE51_RS14045	0.59	-3.6
3,041,708	-		ABIE51_RS14045	0.59	-2.7
3,041,708	-		ABIE51_RS14045	0.59	-1.7
3,041,782	+		ABIE51_RS14045	0.89	-3.6
3,041,782	+		ABIE51_RS14045	0.89	-4.4
3,041,783	-				-1.7
3,041,783	-				-3.3
3,041,898	+		ABIE51_RS14050	0.19	-2.1
3,041,899	-		ABIE51_RS14050	0.19	-1.7
3,041,899	-		ABIE51_RS14050	0.19	-3.9
3,041,987	+		ABIE51_RS14050	0.37	-1.7
3,041,987	+		ABIE51_RS14050	0.37	-1.7
3,041,987	+		ABIE51_RS14050	0.37	-2.4
3,041,988	-		ABIE51_RS14050	0.38	-2.7
3,041,988	-		ABIE51_RS14050	0.38	-3.1
3,042,299	-				-0.0
3,042,485	+				+0.3
3,042,485	+				+0.1
3,042,486	-				-0.9
3,042,486	-				-0.4
3,042,486	-				+0.2
3,042,486	-				-0.0
3,042,486	-				+0.4
3,042,486	-				-0.6
3,042,594	-				-0.5
3,042,594	-				+0.5
3,042,609	+				-3.6
3,042,610	-				-2.1
3,042,622	+				-2.4
3,042,623	-				-1.1
3,042,623	-				-2.9
3,042,623	-				-1.7
3,042,623	-				-3.8
3,042,665	+				-2.1
3,042,665	+				-2.7
3,042,666	-				-1.7
3,042,666	-				-1.1
3,042,689	-				-1.7
3,042,689	-				-1.7
3,042,697	+				-2.4