Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS12635

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
2,728,811	+		ABIE51_RS12635	0.59	-4.4
2,728,812	-		ABIE51_RS12635	0.59	-3.5
2,729,059	+		ABIE51_RS12640	0.41	-0.0
2,729,059	+		ABIE51_RS12640	0.41	+0.3
2,729,059	+		ABIE51_RS12640	0.41	+0.4
2,729,060	-		ABIE51_RS12640	0.41	-0.4
2,729,252	+				+0.9
2,729,252	+				+0.1
2,729,253	-				+0.3
2,729,253	-				-1.0
2,729,253	-				-0.8
2,729,253	-				-0.1
2,729,253	-				-0.3
2,729,253	-				+0.1
2,729,379	-		ABIE51_RS12645	0.20	+0.4
2,729,486	+		ABIE51_RS12645	0.37	+0.3
2,729,486	+		ABIE51_RS12645	0.37	+0.6
2,729,486	+		ABIE51_RS12645	0.37	+0.9
2,729,487	-		ABIE51_RS12645	0.37	+0.3
2,729,546	+		ABIE51_RS12645	0.47	-0.6
2,729,546	+		ABIE51_RS12645	0.47	+0.9
2,729,546	+		ABIE51_RS12645	0.47	-0.4
2,729,546	+		ABIE51_RS12645	0.47	+0.6
2,729,547	-		ABIE51_RS12645	0.47	-0.7
2,729,547	-		ABIE51_RS12645	0.47	-0.1
2,729,790	+		ABIE51_RS12645	0.85	+1.1