Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS06550

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
1,394,316	-		ABIE51_RS06545	0.47	+0.2
1,394,316	-		ABIE51_RS06545	0.47	+0.4
1,394,369	+		ABIE51_RS06545	0.51	+0.3
1,394,369	+		ABIE51_RS06545	0.51	+0.5
1,394,370	-		ABIE51_RS06545	0.51	+1.7
1,394,370	-		ABIE51_RS06545	0.51	+0.3
1,395,070	+				-1.2
1,395,070	+				-0.0
1,395,070	+				-0.6
1,395,070	+				-1.2
1,395,071	-				+0.3
1,395,071	-				+0.7
1,395,466	+		ABIE51_RS06550	0.30	-1.0
1,395,467	-		ABIE51_RS06550	0.30	-1.0
1,395,533	-		ABIE51_RS06550	0.36	-4.2
1,395,556	+		ABIE51_RS06550	0.38	-1.6
1,395,556	+		ABIE51_RS06550	0.38	-2.0
1,395,556	+		ABIE51_RS06550	0.38	-3.2
1,395,556	+		ABIE51_RS06550	0.38	-2.0
1,395,556	+		ABIE51_RS06550	0.38	-2.8
1,395,557	-		ABIE51_RS06550	0.38	-4.2
1,395,557	-		ABIE51_RS06550	0.38	-3.2
1,395,557	-		ABIE51_RS06550	0.38	-4.2
1,395,557	-		ABIE51_RS06550	0.38	-3.8
1,395,557	-		ABIE51_RS06550	0.38	-2.6
1,395,557	-		ABIE51_RS06550	0.38	-3.6
1,395,557	-		ABIE51_RS06550	0.38	-1.6
1,395,557	-		ABIE51_RS06550	0.38	-1.6
1,395,645	+		ABIE51_RS06550	0.46	-0.0
1,395,715	+		ABIE51_RS06550	0.52	-2.7
1,395,716	-		ABIE51_RS06550	0.53	-2.0
1,395,716	-		ABIE51_RS06550	0.53	-3.0
1,395,716	-		ABIE51_RS06550	0.53	-3.8
1,395,847	+		ABIE51_RS06550	0.64	-3.2
1,395,847	+		ABIE51_RS06550	0.64	-2.0
1,395,913	+		ABIE51_RS06550	0.70	-1.0
1,395,913	+		ABIE51_RS06550	0.70	-2.3
1,395,914	-		ABIE51_RS06550	0.70	-3.2
1,395,914	-		ABIE51_RS06550	0.70	-1.6
1,395,979	+		ABIE51_RS06550	0.76	-2.3
1,395,979	+		ABIE51_RS06550	0.76	-1.6
1,395,979	+		ABIE51_RS06550	0.76	-3.0
1,395,979	+		ABIE51_RS06550	0.76	-1.6
1,395,980	-		ABIE51_RS06550	0.76	-4.3
1,395,980	-		ABIE51_RS06550	0.76	-4.4
1,396,087	+		ABIE51_RS06550	0.86	-1.0
1,396,087	+		ABIE51_RS06550	0.86	-3.7
1,396,087	+		ABIE51_RS06550	0.86	-0.0
1,396,087	+		ABIE51_RS06550	0.86	-1.6
1,396,087	+		ABIE51_RS06550	0.86	-2.6
1,396,088	-		ABIE51_RS06550	0.86	-3.2
1,396,088	-		ABIE51_RS06550	0.86	-0.0
1,396,088	-		ABIE51_RS06550	0.86	-3.5
1,396,088	-		ABIE51_RS06550	0.86	-0.0
1,396,088	-		ABIE51_RS06550	0.86	-2.0
1,396,088	-		ABIE51_RS06550	0.86	-4.9
1,396,088	-		ABIE51_RS06550	0.86	-2.0
1,396,088	-		ABIE51_RS06550	0.86	-2.6
1,396,088	-		ABIE51_RS06550	0.86	-1.6
1,396,461	+		ABIE51_RS06555	0.25	-3.8
1,396,518	+		ABIE51_RS06555	0.32	-1.0
1,396,523	+		ABIE51_RS06555	0.33	-4.6
1,396,523	+		ABIE51_RS06555	0.33	-2.8
1,396,523	+		ABIE51_RS06555	0.33	-3.9
1,396,524	-		ABIE51_RS06555	0.33	-2.6
1,396,524	-		ABIE51_RS06555	0.33	-2.6
1,396,537	-		ABIE51_RS06555	0.34	-3.5
1,396,537	-		ABIE51_RS06555	0.34	-3.5
1,396,782	+		ABIE51_RS06555	0.62	-2.3
1,396,782	+		ABIE51_RS06555	0.62	-2.3
1,396,783	-		ABIE51_RS06555	0.63	+0.0
1,396,783	-		ABIE51_RS06555	0.63	-1.6
1,396,949	+		ABIE51_RS06555	0.82	-1.0
1,396,949	+		ABIE51_RS06555	0.82	-1.6
1,396,950	-		ABIE51_RS06555	0.82	-4.7
1,396,950	-		ABIE51_RS06555	0.82	-3.7
1,396,959	+		ABIE51_RS06555	0.83	-1.6
1,396,959	+		ABIE51_RS06555	0.83	-3.6
1,396,960	-		ABIE51_RS06555	0.83	-1.0
1,397,019	+				-0.6
1,397,019	+				-1.6
1,397,019	+				-2.9
1,397,085	+				-0.9
1,397,085	+				-1.0
1,397,085	+				-2.0
1,397,085	+				-1.0
1,397,086	-				-3.2
1,397,086	-				-3.9
1,397,086	-				+0.0
1,397,131	-				+0.5