Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS14140

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
3,055,571	-				+0.2
3,055,588	+				-0.1
3,055,588	+				-0.7
3,055,588	+				-0.2
3,055,589	-				-0.1
3,055,589	-				-0.8
3,055,589	-				+0.2
3,055,589	-				-0.4
3,055,707	-				-0.0
3,055,861	+				+0.0
3,055,862	-				+0.6
3,055,862	-				+0.7
3,055,936	-				+0.1
3,055,936	-				+0.1
3,056,009	+				-0.6
3,056,010	-				+0.5
3,056,013	-				-0.0
3,056,013	-				-0.2
3,056,013	-				-0.4
3,056,013	-				-0.9
3,056,013	-				+0.8
3,056,143	-				-0.5
3,056,143	-				-0.8
3,056,221	-		ABIE51_RS14135	0.75	-4.3
3,056,232	-				-5.5
3,056,232	-				-1.8
3,056,232	-				-5.9
3,056,232	-				-5.5
3,056,232	-				-3.3
3,056,232	-				-5.4
3,056,232	-				-1.8
3,056,232	-				-3.3
3,056,232	-				-5.4
3,056,232	-				-2.3
3,056,716	-				-0.2
3,056,716	-				-0.8
3,056,716	-				+0.3
3,056,717	+				+0.9
3,056,718	-				+2.0
3,056,718	-				+0.0
3,057,060	-		ABIE51_RS14145	0.10	-1.2
3,057,470	+		ABIE51_RS14145	0.27	-0.0
3,057,471	-		ABIE51_RS14145	0.27	-1.3
3,057,488	+		ABIE51_RS14145	0.28	-0.7
3,057,488	+		ABIE51_RS14145	0.28	-0.3
3,057,488	+		ABIE51_RS14145	0.28	-0.5
3,057,488	+		ABIE51_RS14145	0.28	+1.6
3,057,489	-		ABIE51_RS14145	0.28	-2.6