Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS05335

Experiment: Ying_sugar7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 3
1,156,315	+		ABIE51_RS05325	0.46	+0.6
1,156,315	+		ABIE51_RS05325	0.46	+0.8
1,156,316	-		ABIE51_RS05325	0.46	+1.3
1,156,316	-		ABIE51_RS05325	0.46	+0.4
1,156,316	-		ABIE51_RS05325	0.46	+0.4
1,156,316	-		ABIE51_RS05325	0.46	-0.8
1,156,361	-		ABIE51_RS05325	0.56	+0.4
1,156,361	-		ABIE51_RS05325	0.56	+0.4
1,156,486	+		ABIE51_RS05325	0.82	+0.2
1,156,525	+				+0.8
1,156,526	-				+0.1
1,156,526	-				+0.5
1,156,543	+				+0.2
1,156,789	+		ABIE51_RS05330	0.48	-0.1
1,156,789	+		ABIE51_RS05330	0.48	+0.3
1,156,789	+		ABIE51_RS05330	0.48	-0.0
1,156,789	+		ABIE51_RS05330	0.48	+0.1
1,156,789	+		ABIE51_RS05330	0.48	+0.1
1,156,790	-		ABIE51_RS05330	0.48	-0.4
1,156,790	-		ABIE51_RS05330	0.48	+0.2
1,156,790	-		ABIE51_RS05330	0.48	+0.3
1,156,790	-		ABIE51_RS05330	0.48	+0.8
1,156,790	-		ABIE51_RS05330	0.48	+1.6
1,156,790	-		ABIE51_RS05330	0.48	+0.1
1,156,976	+				-0.1
1,157,013	+				+0.1
1,157,014	-				+0.2
1,157,014	-				-0.2
1,157,361	+		ABIE51_RS05335	0.31	+0.7
1,157,361	+		ABIE51_RS05335	0.31	+0.6
1,157,361	+		ABIE51_RS05335	0.31	-0.0
1,157,362	-		ABIE51_RS05335	0.32	+0.1
1,157,362	-		ABIE51_RS05335	0.32	-0.2
1,157,500	-		ABIE51_RS05335	0.68	+0.0
1,157,500	-		ABIE51_RS05335	0.68	+0.3
1,157,500	-		ABIE51_RS05335	0.68	+0.5
1,157,627	+				+0.5
1,157,627	+				+0.0
1,157,628	-				-0.1
1,157,759	+		ABIE51_RS05340	0.16	-1.3
1,157,759	+		ABIE51_RS05340	0.16	-2.1
1,157,759	+		ABIE51_RS05340	0.16	-1.4
1,157,760	-		ABIE51_RS05340	0.16	-0.8
1,157,815	+		ABIE51_RS05340	0.24	-2.4
1,158,240	-		ABIE51_RS05340	0.82	-0.7
1,158,240	-		ABIE51_RS05340	0.82	-1.0
1,158,240	-		ABIE51_RS05340	0.82	-1.2
1,158,281	+		ABIE51_RS05340	0.87	+0.4
1,158,281	+		ABIE51_RS05340	0.87	-0.8
1,158,281	+		ABIE51_RS05340	0.87	-0.4
1,158,281	+		ABIE51_RS05340	0.87	-0.6
1,158,281	+		ABIE51_RS05340	0.87	-0.7
1,158,282	-		ABIE51_RS05340	0.87	-1.5
1,158,282	-		ABIE51_RS05340	0.87	+0.5
1,158,282	-		ABIE51_RS05340	0.87	-0.6
1,158,282	-		ABIE51_RS05340	0.87	-1.2
1,158,282	-		ABIE51_RS05340	0.87	-1.3
1,158,282	-		ABIE51_RS05340	0.87	-0.8
1,158,287	+		ABIE51_RS05340	0.88	-0.9
1,158,371	+				+0.3