Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS11675

Experiment: Ying_sugar7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 3
2,529,281	+				+0.5
2,529,281	+				+0.4
2,529,281	+				+0.2
2,529,281	+				+0.2
2,529,281	+				+0.2
2,529,281	+				-0.3
2,529,281	+				+0.7
2,529,281	+				+0.6
2,529,281	+				+0.6
2,529,281	+				+0.4
2,529,282	-				+0.2
2,529,282	-				+0.5
2,529,282	-				+0.3
2,529,282	-				+0.6
2,529,282	-				+0.4
2,529,389	+		ABIE51_RS11665	0.15	+2.2
2,529,389	+		ABIE51_RS11665	0.15	-0.1
2,529,389	+		ABIE51_RS11665	0.15	-0.7
2,529,389	+		ABIE51_RS11665	0.15	-0.2
2,529,390	-		ABIE51_RS11665	0.16	+0.6
2,529,390	-		ABIE51_RS11665	0.16	+0.7
2,529,390	-		ABIE51_RS11665	0.16	+0.3
2,529,390	-		ABIE51_RS11665	0.16	-0.1
2,529,390	-		ABIE51_RS11665	0.16	+0.7
2,529,390	-		ABIE51_RS11665	0.16	-1.4
2,529,390	-		ABIE51_RS11665	0.16	-0.5
2,529,404	+		ABIE51_RS11665	0.19	+0.4
2,529,405	-		ABIE51_RS11665	0.19	-0.1
2,529,405	-		ABIE51_RS11665	0.19	+2.0
2,529,405	-		ABIE51_RS11665	0.19	+0.4
2,529,530	+		ABIE51_RS11665	0.51	-0.7
2,529,530	+		ABIE51_RS11665	0.51	+0.6
2,529,531	-		ABIE51_RS11665	0.51	+0.2
2,529,531	-		ABIE51_RS11665	0.51	+0.6
2,529,531	-		ABIE51_RS11665	0.51	+0.7
2,529,531	-		ABIE51_RS11665	0.51	+0.3
2,529,531	-		ABIE51_RS11665	0.51	+0.2
2,529,629	+		ABIE51_RS11665	0.76	+0.3
2,529,629	+		ABIE51_RS11665	0.76	+0.8
2,529,629	+		ABIE51_RS11665	0.76	-0.6
2,529,630	-		ABIE51_RS11665	0.77	+0.8
2,529,630	-		ABIE51_RS11665	0.77	+0.9
2,529,763	+				-0.1
2,529,763	+				-0.4
2,529,764	-				+0.7
2,529,897	+		ABIE51_RS11670	0.49	+2.2
2,529,897	+		ABIE51_RS11670	0.49	+0.4
2,529,897	+		ABIE51_RS11670	0.49	+0.4
2,529,897	+		ABIE51_RS11670	0.49	+0.4
2,529,897	+		ABIE51_RS11670	0.49	+1.2
2,529,897	+		ABIE51_RS11670	0.49	+0.7
2,529,898	-		ABIE51_RS11670	0.50	-0.5
2,530,103	+		ABIE51_RS11675	0.16	-0.1
2,530,104	-		ABIE51_RS11675	0.16	-0.4
2,530,288	+		ABIE51_RS11675	0.57	-0.5
2,530,288	+		ABIE51_RS11675	0.57	-0.1
2,530,288	+		ABIE51_RS11675	0.57	-0.6
2,530,288	+		ABIE51_RS11675	0.57	-1.3
2,530,289	-		ABIE51_RS11675	0.57	+0.1
2,530,289	-		ABIE51_RS11675	0.57	+0.2
2,530,289	-		ABIE51_RS11675	0.57	+0.2
2,530,289	-		ABIE51_RS11675	0.57	-0.0
2,530,289	-		ABIE51_RS11675	0.57	+1.2
2,530,428	+		ABIE51_RS11675	0.88	-0.9
2,530,428	+		ABIE51_RS11675	0.88	-0.6
2,530,428	+		ABIE51_RS11675	0.88	+1.1
2,530,428	+		ABIE51_RS11675	0.88	-0.7
2,530,428	+		ABIE51_RS11675	0.88	-0.1
2,530,428	+		ABIE51_RS11675	0.88	-0.3
2,530,429	-		ABIE51_RS11675	0.88	-3.3
2,530,429	-		ABIE51_RS11675	0.88	-1.1
2,530,429	-		ABIE51_RS11675	0.88	-1.7
2,530,429	-		ABIE51_RS11675	0.88	-2.1
2,530,429	-		ABIE51_RS11675	0.88	+0.9
2,530,429	-		ABIE51_RS11675	0.88	-0.1
2,530,429	-		ABIE51_RS11675	0.88	+0.1
2,530,429	-		ABIE51_RS11675	0.88	+0.3
2,530,429	-		ABIE51_RS11675	0.88	+0.7
2,530,429	-		ABIE51_RS11675	0.88	+0.1
2,530,429	-		ABIE51_RS11675	0.88	-0.3
2,530,429	-		ABIE51_RS11675	0.88	-0.3
2,530,429	-		ABIE51_RS11675	0.88	+0.4
2,530,429	-		ABIE51_RS11675	0.88	+0.1
2,530,490	-				+0.1
2,530,636	+		ABIE51_RS11680	0.18	-1.1
2,530,636	+		ABIE51_RS11680	0.18	-1.1
2,530,636	+		ABIE51_RS11680	0.18	-1.6
2,530,637	-		ABIE51_RS11680	0.18	-2.6
2,530,730	-		ABIE51_RS11680	0.36	-1.1
2,530,916	-		ABIE51_RS11680	0.73	-1.1
2,531,084	+				-0.2
2,531,194	+				+0.7
2,531,194	+				-0.0
2,531,195	-				+0.6
2,531,201	+				+0.1
2,531,202	-				+0.4
2,531,202	-				+0.5
2,531,202	-				-0.1
2,531,202	-				-0.1
2,531,202	-				-2.1
2,531,202	-				+0.5
2,531,426	+				-1.0
2,531,426	+				+0.3
2,531,426	+				+0.2
2,531,426	+				+1.0
2,531,465	+		ABIE51_RS11685	0.10	-1.7
2,531,465	+		ABIE51_RS11685	0.10	-0.4
2,531,466	-		ABIE51_RS11685	0.10	+0.0
2,531,466	-		ABIE51_RS11685	0.10	+0.5
2,531,466	-		ABIE51_RS11685	0.10	+0.7