Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS12270

Experiment: Ying_sugar7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 3
2,648,165	+		ABIE51_RS12265	0.74	+0.5
2,648,165	+		ABIE51_RS12265	0.74	+0.2
2,648,166	-		ABIE51_RS12265	0.74	+0.2
2,648,444	+		ABIE51_RS12265	0.87	-0.1
2,648,444	+		ABIE51_RS12265	0.87	-0.2
2,648,445	-		ABIE51_RS12265	0.87	-1.0
2,648,445	-		ABIE51_RS12265	0.87	-0.1
2,648,501	-		ABIE51_RS12265	0.90	-0.2
2,648,501	-		ABIE51_RS12265	0.90	+0.4
2,648,501	-		ABIE51_RS12265	0.90	+1.3
2,648,561	-				+0.3
2,648,760	-				+0.2
2,648,812	-				+0.1
2,648,812	-				+1.1
2,648,812	-				+0.7
2,648,812	-				+0.0
2,648,923	+				-0.7
2,648,923	+				-1.1
2,649,176	+		ABIE51_RS12270	0.12	+0.0
2,649,176	+		ABIE51_RS12270	0.12	-0.4
2,649,176	+		ABIE51_RS12270	0.12	+0.5
2,649,176	+		ABIE51_RS12270	0.12	-0.1
2,649,176	+		ABIE51_RS12270	0.12	+0.8
2,649,177	-		ABIE51_RS12270	0.12	-1.2
2,649,177	-		ABIE51_RS12270	0.12	-0.4
2,649,357	+		ABIE51_RS12270	0.33	-0.8
2,649,357	+		ABIE51_RS12270	0.33	-0.5
2,649,358	-		ABIE51_RS12270	0.33	+0.4
2,649,654	+		ABIE51_RS12270	0.67	+0.4
2,649,654	+		ABIE51_RS12270	0.67	+0.1
2,649,655	-		ABIE51_RS12270	0.67	+0.1
2,649,655	-		ABIE51_RS12270	0.67	-0.1
2,649,655	-		ABIE51_RS12270	0.67	-0.1
2,649,746	+		ABIE51_RS12270	0.78	+0.1
2,649,746	+		ABIE51_RS12270	0.78	+0.2
2,649,746	+		ABIE51_RS12270	0.78	+0.8
2,649,747	-		ABIE51_RS12270	0.78	+1.0
2,649,747	-		ABIE51_RS12270	0.78	-0.1
2,649,747	-		ABIE51_RS12270	0.78	+0.3
2,649,747	-		ABIE51_RS12270	0.78	-0.2
2,649,747	-		ABIE51_RS12270	0.78	+0.3
2,649,747	-		ABIE51_RS12270	0.78	-0.3
2,649,747	-		ABIE51_RS12270	0.78	+0.2
2,649,747	-		ABIE51_RS12270	0.78	+0.4
2,649,750	+		ABIE51_RS12270	0.78	-0.1
2,649,751	-		ABIE51_RS12270	0.78	-0.9
2,649,751	-		ABIE51_RS12270	0.78	-0.1
2,649,751	-		ABIE51_RS12270	0.78	+1.6
2,649,751	-		ABIE51_RS12270	0.78	+0.2
2,649,956	-				-1.1
2,650,126	-		ABIE51_RS12275	0.18	-0.4
2,650,210	+		ABIE51_RS12275	0.29	-1.1
2,650,210	+		ABIE51_RS12275	0.29	-0.7
2,650,210	+		ABIE51_RS12275	0.29	-0.4
2,650,210	+		ABIE51_RS12275	0.29	+0.4
2,650,210	+		ABIE51_RS12275	0.29	-0.1
2,650,211	-		ABIE51_RS12275	0.29	-0.3
2,650,211	-		ABIE51_RS12275	0.29	+0.3
2,650,211	-		ABIE51_RS12275	0.29	-0.6
2,650,211	-		ABIE51_RS12275	0.29	-0.6
2,650,413	+		ABIE51_RS12275	0.55	-0.2
2,650,414	-		ABIE51_RS12275	0.56	+0.2
2,650,414	-		ABIE51_RS12275	0.56	-0.2
2,650,414	-		ABIE51_RS12275	0.56	-0.4
2,650,414	-		ABIE51_RS12275	0.56	-0.9
2,650,414	-		ABIE51_RS12275	0.56	-0.4
2,650,426	+		ABIE51_RS12275	0.57	-0.0
2,650,500	+		ABIE51_RS12275	0.67	+0.1
2,650,501	-		ABIE51_RS12275	0.67	-0.2
2,650,784	+				-0.6
2,650,784	+				+0.4
2,650,785	-				-0.0
2,650,785	-				-0.6
2,650,785	-				-1.5
2,650,785	-				-1.5