Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS19210

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
4,186,139	+		ABIE51_RS19205	0.41	-0.0
4,186,139	+		ABIE51_RS19205	0.41	-2.0
4,186,139	+		ABIE51_RS19205	0.41	-1.6
4,186,139	+		ABIE51_RS19205	0.41	-1.5
4,186,139	+		ABIE51_RS19205	0.41	-1.1
4,186,139	+		ABIE51_RS19205	0.41	-0.9
4,186,139	+		ABIE51_RS19205	0.41	-1.2
4,186,139	+		ABIE51_RS19205	0.41	-1.6
4,186,140	-		ABIE51_RS19205	0.41	-1.2
4,186,140	-		ABIE51_RS19205	0.41	-2.0
4,186,140	-		ABIE51_RS19205	0.41	-1.6
4,186,140	-		ABIE51_RS19205	0.41	-1.6
4,186,140	-		ABIE51_RS19205	0.41	-1.5
4,186,226	+		ABIE51_RS19205	0.46	-1.2
4,186,227	-		ABIE51_RS19205	0.47	-3.6
4,186,227	-		ABIE51_RS19205	0.47	-1.6
4,186,227	-		ABIE51_RS19205	0.47	-2.2
4,186,227	-		ABIE51_RS19205	0.47	-1.9
4,186,241	+		ABIE51_RS19205	0.47	-2.0
4,186,316	+		ABIE51_RS19205	0.52	-1.2
4,186,316	+		ABIE51_RS19205	0.52	+2.0
4,186,316	+		ABIE51_RS19205	0.52	-1.7
4,186,316	+		ABIE51_RS19205	0.52	-1.0
4,186,317	-		ABIE51_RS19205	0.52	-1.2
4,186,317	-		ABIE51_RS19205	0.52	-2.3
4,186,317	-		ABIE51_RS19205	0.52	-1.8
4,186,317	-		ABIE51_RS19205	0.52	-1.3
4,186,317	-		ABIE51_RS19205	0.52	-1.1
4,186,317	-		ABIE51_RS19205	0.52	-1.6
4,186,317	-		ABIE51_RS19205	0.52	+1.0
4,186,653	-		ABIE51_RS19205	0.73	-1.8
4,186,982	+				-1.4
4,186,982	+				-2.2
4,186,982	+				-2.3
4,186,982	+				-1.7
4,186,982	+				-1.5
4,186,983	-				-1.5
4,186,983	-				-2.6
4,187,095	+				-1.4
4,187,095	+				-1.5
4,187,095	+				-0.0
4,187,095	+				-1.6
4,187,095	+				-0.3
4,187,095	+				-0.7
4,187,096	-				-0.3
4,187,096	-				-0.3
4,187,096	-				-1.2
4,187,096	-				-0.6
4,187,353	+		ABIE51_RS19210	0.25	-0.9
4,187,354	-		ABIE51_RS19210	0.25	-0.0
4,187,354	-		ABIE51_RS19210	0.25	-1.5
4,187,527	+		ABIE51_RS19210	0.44	-1.3
4,187,527	+		ABIE51_RS19210	0.44	-0.7
4,187,527	+		ABIE51_RS19210	0.44	-1.3
4,187,527	+		ABIE51_RS19210	0.44	-1.7
4,187,527	+		ABIE51_RS19210	0.44	-0.0
4,187,527	+		ABIE51_RS19210	0.44	-1.3
4,187,527	+		ABIE51_RS19210	0.44	-2.0
4,187,528	-		ABIE51_RS19210	0.44	-1.7
4,187,528	-		ABIE51_RS19210	0.44	-1.6
4,187,626	+		ABIE51_RS19210	0.54	-2.3
4,187,627	-		ABIE51_RS19210	0.55	-1.5
4,187,627	-		ABIE51_RS19210	0.55	-2.3
4,187,632	+		ABIE51_RS19210	0.55	-1.8
4,187,632	+		ABIE51_RS19210	0.55	-0.0
4,187,632	+		ABIE51_RS19210	0.55	-2.3
4,187,632	+		ABIE51_RS19210	0.55	-1.4
4,187,632	+		ABIE51_RS19210	0.55	-2.6
4,187,633	-		ABIE51_RS19210	0.55	-1.5
4,187,633	-		ABIE51_RS19210	0.55	-1.9
4,187,633	-		ABIE51_RS19210	0.55	-0.7
4,187,633	-		ABIE51_RS19210	0.55	-1.9
4,187,692	+		ABIE51_RS19210	0.61	-1.9
4,187,692	+		ABIE51_RS19210	0.61	-1.6
4,187,692	+		ABIE51_RS19210	0.61	-0.7
4,187,692	+		ABIE51_RS19210	0.61	-2.2
4,187,692	+		ABIE51_RS19210	0.61	-4.1
4,187,692	+		ABIE51_RS19210	0.61	-1.6
4,187,692	+		ABIE51_RS19210	0.61	-2.2
4,187,692	+		ABIE51_RS19210	0.61	-2.4
4,187,693	-		ABIE51_RS19210	0.62	-1.7
4,187,693	-		ABIE51_RS19210	0.62	-1.8
4,187,693	-		ABIE51_RS19210	0.62	-1.1
4,187,693	-		ABIE51_RS19210	0.62	-1.6
4,187,693	-		ABIE51_RS19210	0.62	-1.0
4,187,693	-		ABIE51_RS19210	0.62	-2.5
4,187,693	-		ABIE51_RS19210	0.62	-2.3
4,187,693	-		ABIE51_RS19210	0.62	-4.8
4,187,693	-		ABIE51_RS19210	0.62	-1.5
4,187,693	-		ABIE51_RS19210	0.62	+0.3
4,187,693	-		ABIE51_RS19210	0.62	-1.2
4,187,693	-		ABIE51_RS19210	0.62	-1.9
4,187,842	+		ABIE51_RS19210	0.77	-2.8
4,187,843	-		ABIE51_RS19210	0.78	-2.6
4,187,911	+		ABIE51_RS19210	0.85	-1.0
4,187,912	-		ABIE51_RS19210	0.85	-2.3
4,187,912	-		ABIE51_RS19210	0.85	-1.6
4,188,088	+				-0.7
4,188,088	+				-1.3
4,188,088	+				-0.8
4,188,088	+				-0.8
4,188,088	+				-0.2
4,188,088	+				-0.6
4,188,088	+				-1.0
4,188,088	+				-1.0
4,188,088	+				-1.7
4,188,089	-				-0.7
4,188,089	-				-0.5
4,188,089	-				-0.5
4,188,089	-				+0.7
4,188,089	-				+0.0
4,188,089	-				-0.0
4,188,089	-				-0.1
4,188,089	-				-0.3
4,188,089	-				+1.0
4,188,209	+				-0.0
4,188,209	+				-1.6
4,188,209	+				-1.2
4,188,209	+				-1.3
4,188,209	+				-1.0
4,188,263	+				-0.7
4,188,263	+				-0.0
4,188,263	+				-0.0
4,188,264	-				+0.1
4,188,264	-				-0.5
4,188,264	-				+0.6
4,188,264	-				-0.0
4,188,266	+				-0.3
4,188,327	+				-0.4
4,188,327	+				-0.4
4,188,327	+				-0.2
4,188,327	+				-0.4
4,188,327	+				-0.7
4,188,327	+				+1.6
4,188,327	+				-0.8
4,188,327	+				-0.6
4,188,327	+				-0.3
4,188,327	+				-1.5
4,188,328	-				-0.5
4,188,328	-				-0.2
4,188,328	-				-0.2
4,188,328	-				+0.3
4,188,328	-				-0.6
4,188,328	-				-0.0
4,188,328	-				-0.5
4,188,328	-				+0.3
4,188,328	-				-0.6
4,188,328	-				+1.7
4,188,328	-				+1.0
4,188,369	+				-0.1
4,188,369	+				-0.3
4,188,369	+				-0.4
4,188,370	-				+0.3
4,188,370	-				+0.1
4,188,370	-				+0.4
4,188,374	+				-0.8
4,188,374	+				-0.0
4,188,683	+				-1.3
4,188,683	+				-1.4
4,188,683	+				-0.7
4,188,684	-				-0.7
4,188,684	-				-1.4
4,188,684	-				-1.2
4,188,684	-				-1.4