Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS18995

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
4,132,287	+		ABIE51_RS18990	0.78	+1.0
4,132,287	+		ABIE51_RS18990	0.78	+1.0
4,132,287	+		ABIE51_RS18990	0.78	-0.4
4,132,287	+		ABIE51_RS18990	0.78	-0.2
4,132,287	+		ABIE51_RS18990	0.78	+0.2
4,132,287	+		ABIE51_RS18990	0.78	-0.2
4,132,287	+		ABIE51_RS18990	0.78	-0.6
4,132,287	+		ABIE51_RS18990	0.78	+0.2
4,132,287	+		ABIE51_RS18990	0.78	+0.2
4,132,288	-		ABIE51_RS18990	0.78	+0.0
4,132,288	-		ABIE51_RS18990	0.78	+1.0
4,132,288	-		ABIE51_RS18990	0.78	+0.1
4,132,471	-		ABIE51_RS18990	0.86	-0.0
4,132,827	+				+0.4
4,132,860	+				-0.2
4,132,860	+				+0.2
4,132,860	+				+0.4
4,132,860	+				+0.1
4,132,860	+				+0.4
4,132,860	+				+0.3
4,132,860	+				+0.4
4,132,861	-				+1.0
4,132,861	-				-0.3
4,132,861	-				-0.7
4,132,864	+				+0.6
4,132,864	+				+1.0
4,132,864	+				+0.3
4,132,864	+				+0.2
4,132,864	+				+0.4
4,132,864	+				+0.7
4,132,864	+				+0.1
4,132,864	+				+0.1
4,132,864	+				-0.3
4,132,865	-				-0.2
4,132,865	-				-0.0
4,132,865	-				+1.2
4,132,865	-				+1.6
4,132,865	-				-0.0
4,132,865	-				-0.8
4,132,865	-				-0.2
4,132,865	-				-0.4
4,132,865	-				-0.2
4,132,918	+				+0.3
4,132,918	+				-0.4
4,132,918	+				+0.1
4,132,918	+				+1.3
4,132,918	+				+1.0
4,132,919	-				-0.6
4,133,065	+				-0.2
4,133,065	+				+2.0
4,133,074	+				-1.9
4,133,146	+				-1.0
4,133,146	+				-3.3
4,133,407	+		ABIE51_RS18995	0.24	-2.4
4,133,408	-		ABIE51_RS18995	0.24	-2.6
4,133,749	+		ABIE51_RS18995	0.45	-1.6
4,133,750	-		ABIE51_RS18995	0.45	-2.6
4,133,875	+		ABIE51_RS18995	0.53	-3.2
4,133,875	+		ABIE51_RS18995	0.53	-3.0
4,133,876	-		ABIE51_RS18995	0.53	-1.7
4,133,944	+		ABIE51_RS18995	0.57	-2.0
4,133,945	-		ABIE51_RS18995	0.57	-1.8
4,133,945	-		ABIE51_RS18995	0.57	+1.0
4,133,945	-		ABIE51_RS18995	0.57	-2.3
4,134,061	+		ABIE51_RS18995	0.64	-1.6
4,134,062	-		ABIE51_RS18995	0.64	-2.8
4,134,062	-		ABIE51_RS18995	0.64	-2.3
4,134,128	-		ABIE51_RS18995	0.68	-1.2
4,134,190	+		ABIE51_RS18995	0.72	-1.1
4,134,820	+				+0.4
4,134,820	+				-0.3
4,134,821	-				-0.6
4,134,821	-				+0.7
4,134,868	+		ABIE51_RS19000	0.12	+0.4
4,134,868	+		ABIE51_RS19000	0.12	+0.7
4,134,868	+		ABIE51_RS19000	0.12	-0.7
4,134,868	+		ABIE51_RS19000	0.12	+0.8
4,134,869	-		ABIE51_RS19000	0.12	+0.5
4,135,078	+		ABIE51_RS19000	0.24	-0.0
4,135,126	+		ABIE51_RS19000	0.26	+0.6
4,135,210	+		ABIE51_RS19000	0.31	-0.2
4,135,511	-		ABIE51_RS19000	0.48	+0.3
4,135,546	+		ABIE51_RS19000	0.50	-0.2
4,135,546	+		ABIE51_RS19000	0.50	-0.1
4,135,619	-		ABIE51_RS19000	0.54	+0.2