Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS17060

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
3,714,626	-				+0.6
3,714,684	+				-0.5
3,714,685	-				+0.1
3,714,685	-				+0.1
3,714,685	-				-0.3
3,714,720	+				-0.7
3,714,720	+				+0.8
3,714,720	+				-1.0
3,714,720	+				-0.2
3,714,721	-				+0.4
3,714,735	+				-0.1
3,714,736	-				+1.1
3,714,738	+				-0.0
3,714,738	+				-0.7
3,714,738	+				+0.6
3,714,738	+				-0.7
3,714,738	+				-0.2
3,714,738	+				-1.7
3,714,738	+				+0.5
3,714,739	-				-0.5
3,714,739	-				-0.6
3,714,739	-				-0.2
3,714,739	-				-0.4
3,714,739	-				-0.4
3,714,739	-				-0.1
3,714,739	-				-0.6
3,714,739	-				+0.6
3,714,739	-				-0.1
3,714,806	+				+0.8
3,715,200	+		ABIE51_RS17055	0.61	+0.3
3,715,200	+		ABIE51_RS17055	0.61	-0.5
3,715,201	-		ABIE51_RS17055	0.61	-0.2
3,715,201	-		ABIE51_RS17055	0.61	-0.1
3,715,456	+				+0.1
3,715,456	+				-0.4
3,715,549	+				+0.4
3,715,549	+				+0.0
3,715,549	+				-0.0
3,715,550	-				-0.1
3,715,550	-				-0.4
3,715,560	-				-0.3
3,715,560	-				+0.7
3,715,560	-				+0.3
3,715,563	+				+0.5
3,715,563	+				+1.6
3,715,563	+				+1.5
3,715,563	+				-0.2
3,715,563	+				-0.2
3,715,564	-				-0.3
3,715,564	-				+0.2
3,715,647	+				-1.5
3,715,647	+				-1.5
3,715,647	+				-2.5
3,715,647	+				-1.9
3,715,647	+				-1.9
3,715,648	-				-1.6
3,715,648	-				-3.6
3,715,648	-				-3.6
3,715,648	-				-1.1
3,715,648	-				-0.9
3,715,648	-				-2.5
3,715,648	-				-2.4
3,715,648	-				-2.3
3,715,671	+				-2.5
3,715,671	+				-1.7
3,715,671	+				-3.4
3,715,671	+				-1.9
3,715,672	-				-1.3
3,715,672	-				-2.6
3,715,672	-				-1.2
3,715,672	-				-2.2
3,715,840	-		ABIE51_RS17060	0.24	-1.9
3,715,840	-		ABIE51_RS17060	0.24	-1.9
3,716,328	+		ABIE51_RS17060	0.65	-2.1
3,716,328	+		ABIE51_RS17060	0.65	+0.1
3,716,328	+		ABIE51_RS17060	0.65	-2.1
3,716,328	+		ABIE51_RS17060	0.65	-1.7
3,716,329	-		ABIE51_RS17060	0.65	-3.6
3,716,329	-		ABIE51_RS17060	0.65	-0.9
3,716,329	-		ABIE51_RS17060	0.65	-1.3
3,716,329	-		ABIE51_RS17060	0.65	-2.6
3,716,329	-		ABIE51_RS17060	0.65	-0.9
3,716,329	-		ABIE51_RS17060	0.65	-2.7
3,716,329	-		ABIE51_RS17060	0.65	-2.6
3,716,349	+		ABIE51_RS17060	0.67	-2.7
3,716,349	+		ABIE51_RS17060	0.67	-1.5
3,716,349	+		ABIE51_RS17060	0.67	-1.8
3,716,349	+		ABIE51_RS17060	0.67	-3.5
3,716,350	-		ABIE51_RS17060	0.67	-2.0
3,716,350	-		ABIE51_RS17060	0.67	-1.6
3,716,881	-				+0.2