Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS15890

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
3,446,995	+		ABIE51_RS15885	0.38	+1.0
3,446,996	-		ABIE51_RS15885	0.38	+0.6
3,447,027	-		ABIE51_RS15885	0.41	-0.7
3,447,028	+		ABIE51_RS15885	0.41	+0.0
3,447,128	-		ABIE51_RS15885	0.50	-1.6
3,447,128	-		ABIE51_RS15885	0.50	+1.0
3,447,128	-		ABIE51_RS15885	0.50	+0.0
3,447,128	-		ABIE51_RS15885	0.50	+0.0
3,447,128	-		ABIE51_RS15885	0.50	+0.0
3,447,226	-		ABIE51_RS15885	0.58	-1.0
3,447,226	-		ABIE51_RS15885	0.58	+1.0
3,447,226	-		ABIE51_RS15885	0.58	+0.0
3,447,226	-		ABIE51_RS15885	0.58	-1.0
3,447,376	+		ABIE51_RS15885	0.72	+0.3
3,447,377	-		ABIE51_RS15885	0.72	-1.0
3,447,377	-		ABIE51_RS15885	0.72	+1.0
3,447,541	+		ABIE51_RS15885	0.87	+0.0
3,447,541	-		ABIE51_RS15885	0.87	+0.0
3,447,542	-		ABIE51_RS15885	0.87	+0.0
3,447,984	+		ABIE51_RS15890	0.16	-3.1
3,447,984	+		ABIE51_RS15890	0.16	-3.4
3,447,984	+		ABIE51_RS15890	0.16	-1.0
3,447,985	-		ABIE51_RS15890	0.17	-1.0
3,448,144	-		ABIE51_RS15890	0.32	-2.0
3,448,144	-		ABIE51_RS15890	0.32	-2.3
3,448,266	+		ABIE51_RS15890	0.43	-2.6
3,448,267	-		ABIE51_RS15890	0.43	-2.3
3,448,267	-		ABIE51_RS15890	0.43	-3.3
3,448,281	+		ABIE51_RS15890	0.44	-2.8
3,448,282	-		ABIE51_RS15890	0.45	-1.0
3,448,422	+		ABIE51_RS15890	0.58	-2.3
3,448,423	-		ABIE51_RS15890	0.58	-2.3
3,448,423	-		ABIE51_RS15890	0.58	-3.0
3,448,503	+		ABIE51_RS15890	0.65	-2.6
3,448,503	+		ABIE51_RS15890	0.65	+0.0
3,448,503	+		ABIE51_RS15890	0.65	-1.6
3,448,504	-		ABIE51_RS15890	0.66	-2.6
3,449,157	-		ABIE51_RS15895	0.40	+0.4
3,449,205	+		ABIE51_RS15895	0.47	+0.8
3,449,237	+		ABIE51_RS15895	0.52	+0.4
3,449,237	+		ABIE51_RS15895	0.52	+0.2
3,449,238	-		ABIE51_RS15895	0.52	+0.1
3,449,301	+		ABIE51_RS15895	0.61	+0.3
3,449,301	+		ABIE51_RS15895	0.61	+1.0
3,449,301	+		ABIE51_RS15895	0.61	-0.7
3,449,302	-		ABIE51_RS15895	0.61	+0.3
3,449,302	-		ABIE51_RS15895	0.61	-0.7
3,449,506	+				-1.4
3,449,520	+				-0.1
3,449,520	+				+0.0
3,449,520	+				+0.4
3,449,612	+				+0.1
3,449,612	+				+0.1
3,449,613	-				-2.0
3,449,726	+		ABIE51_RS15900	0.18	+0.6
3,449,726	+		ABIE51_RS15900	0.18	-1.1
3,449,726	+		ABIE51_RS15900	0.18	-0.0