Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS15375

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
3,338,975	+				+0.0
3,338,975	+				+0.1
3,338,975	+				-0.1
3,338,975	+				+0.4
3,338,976	-				+0.3
3,338,976	-				+0.1
3,338,976	-				+1.0
3,338,976	-				-0.4
3,339,012	+				-0.4
3,339,012	+				-0.2
3,339,012	+				+0.2
3,339,141	+				-0.7
3,339,149	+				+0.2
3,339,308	-				-0.0
3,339,328	+				-0.4
3,339,328	+				+0.3
3,339,328	+				-0.0
3,339,329	-				-0.0
3,339,329	-				-1.3
3,339,329	-				+0.1
3,339,329	-				+0.8
3,339,430	+		ABIE51_RS15370	0.21	+1.2
3,339,431	-		ABIE51_RS15370	0.21	+0.3
3,339,431	-		ABIE51_RS15370	0.21	+1.2
3,339,431	-		ABIE51_RS15370	0.21	+0.3
3,339,431	-		ABIE51_RS15370	0.21	-0.4
3,339,728	-		ABIE51_RS15370	0.71	-0.1
3,339,728	-		ABIE51_RS15370	0.71	+0.4
3,339,756	+		ABIE51_RS15370	0.75	+1.9
3,339,757	-		ABIE51_RS15370	0.76	+0.3
3,340,016	+		ABIE51_RS15375	0.14	+0.4
3,340,016	+		ABIE51_RS15375	0.14	-1.3
3,340,016	+		ABIE51_RS15375	0.14	-0.4
3,340,017	-		ABIE51_RS15375	0.14	-1.8
3,340,017	-		ABIE51_RS15375	0.14	-0.3
3,340,017	-		ABIE51_RS15375	0.14	-1.1
3,340,058	+		ABIE51_RS15375	0.19	-2.0
3,340,058	+		ABIE51_RS15375	0.19	-2.2
3,340,080	+		ABIE51_RS15375	0.22	-1.0
3,340,080	+		ABIE51_RS15375	0.22	-0.7
3,340,184	+		ABIE51_RS15375	0.36	-1.1
3,340,185	-		ABIE51_RS15375	0.37	-1.3
3,340,442	+		ABIE51_RS15375	0.71	-1.7
3,340,478	+		ABIE51_RS15375	0.76	-0.0
3,340,479	-		ABIE51_RS15375	0.76	-1.4
3,340,479	-		ABIE51_RS15375	0.76	-0.6
3,340,781	-		ABIE51_RS15380	0.40	-0.2
3,341,036	+				-0.2
3,341,037	-				-0.4
3,341,051	+				+0.8
3,341,051	+				-0.5