Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS14055

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
3,041,707	+		ABIE51_RS14045	0.58	-2.8
3,041,707	+		ABIE51_RS14045	0.58	-2.3
3,041,707	+		ABIE51_RS14045	0.58	-1.0
3,041,708	-		ABIE51_RS14045	0.59	-2.4
3,041,708	-		ABIE51_RS14045	0.59	-2.6
3,041,708	-		ABIE51_RS14045	0.59	-1.6
3,041,782	+		ABIE51_RS14045	0.89	-3.4
3,041,782	+		ABIE51_RS14045	0.89	-4.2
3,041,783	-				-1.6
3,041,783	-				-3.1
3,041,898	+		ABIE51_RS14050	0.19	-2.0
3,041,899	-		ABIE51_RS14050	0.19	-1.6
3,041,899	-		ABIE51_RS14050	0.19	-2.2
3,041,987	+		ABIE51_RS14050	0.37	-1.6
3,041,987	+		ABIE51_RS14050	0.37	-0.6
3,041,987	+		ABIE51_RS14050	0.37	-2.3
3,041,988	-		ABIE51_RS14050	0.38	-1.6
3,041,988	-		ABIE51_RS14050	0.38	-3.0
3,042,299	-				+0.1
3,042,485	+				+0.3
3,042,485	+				+0.3
3,042,486	-				-2.6
3,042,486	-				-1.0
3,042,486	-				+0.1
3,042,486	-				-0.0
3,042,486	-				-0.1
3,042,486	-				-0.3
3,042,594	-				+0.0
3,042,594	-				+0.2
3,042,609	+				-3.4
3,042,610	-				-2.0
3,042,622	+				-0.7
3,042,623	-				-1.0
3,042,623	-				-2.8
3,042,623	-				-1.6
3,042,623	-				-2.7
3,042,665	+				-2.0
3,042,665	+				-2.6
3,042,666	-				-1.6
3,042,666	-				-1.0
3,042,689	-				-1.6
3,042,689	-				-1.6
3,042,697	+				-0.3
3,042,906	-		ABIE51_RS14055	0.30	-1.8
3,042,906	-		ABIE51_RS14055	0.30	-4.6
3,043,481	+		ABIE51_RS14055	0.86	-2.8
3,043,481	+		ABIE51_RS14055	0.86	-1.0
3,043,482	-		ABIE51_RS14055	0.86	-1.6
3,043,514	+		ABIE51_RS14055	0.89	-0.8
3,043,711	-		ABIE51_RS14060	0.12	-0.4
3,043,736	-		ABIE51_RS14060	0.15	-0.7
3,043,742	-		ABIE51_RS14060	0.16	-2.9
3,043,742	-		ABIE51_RS14060	0.16	-2.6
3,043,742	-		ABIE51_RS14060	0.16	+0.0
3,043,742	-		ABIE51_RS14060	0.16	+1.0
3,043,742	-		ABIE51_RS14060	0.16	-2.6
3,043,742	-		ABIE51_RS14060	0.16	-1.6
3,043,742	-		ABIE51_RS14060	0.16	-2.3
3,043,775	-		ABIE51_RS14060	0.20	-2.0
3,043,861	+		ABIE51_RS14060	0.31	-3.2
3,044,068	+		ABIE51_RS14060	0.59	-3.0
3,044,069	-		ABIE51_RS14060	0.59	-2.8
3,044,117	-		ABIE51_RS14060	0.65	-1.0
3,044,117	-		ABIE51_RS14060	0.65	+0.0
3,044,152	+		ABIE51_RS14060	0.70	-2.8
3,044,201	+		ABIE51_RS14060	0.76	-2.3
3,044,201	+		ABIE51_RS14060	0.76	+0.0
3,044,202	-		ABIE51_RS14060	0.76	-1.6
3,044,239	+		ABIE51_RS14060	0.81	-2.0
3,044,240	-		ABIE51_RS14060	0.81	-1.6
3,044,248	+		ABIE51_RS14060	0.82	-2.0
3,044,387	+				-0.6
3,044,411	+				-1.0