Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS04825

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
1,045,062	+		ABIE51_RS04820	0.56	-0.4
1,045,062	+		ABIE51_RS04820	0.56	+0.3
1,045,062	+		ABIE51_RS04820	0.56	+0.4
1,045,107	+		ABIE51_RS04820	0.58	+1.2
1,045,107	+		ABIE51_RS04820	0.58	+1.4
1,045,107	+		ABIE51_RS04820	0.58	-0.7
1,045,108	-		ABIE51_RS04820	0.58	+0.8
1,045,170	+		ABIE51_RS04820	0.61	-1.2
1,045,170	+		ABIE51_RS04820	0.61	+1.1
1,045,290	+		ABIE51_RS04820	0.67	-0.1
1,045,290	+		ABIE51_RS04820	0.67	-1.6
1,045,290	+		ABIE51_RS04820	0.67	+0.4
1,045,290	+		ABIE51_RS04820	0.67	+0.4
1,045,291	-		ABIE51_RS04820	0.67	+0.2
1,045,443	+		ABIE51_RS04820	0.75	-1.6
1,045,452	-		ABIE51_RS04820	0.76	-0.9
1,045,503	+		ABIE51_RS04820	0.78	+2.4
1,045,503	+		ABIE51_RS04820	0.78	+0.1
1,045,503	+		ABIE51_RS04820	0.78	+0.4
1,045,503	+		ABIE51_RS04820	0.78	+0.0
1,045,504	-		ABIE51_RS04820	0.78	+1.0
1,045,504	-		ABIE51_RS04820	0.78	-0.3
1,045,504	-		ABIE51_RS04820	0.78	+0.4
1,045,504	-		ABIE51_RS04820	0.78	+0.3
1,045,504	-		ABIE51_RS04820	0.78	+0.9
1,045,632	+		ABIE51_RS04820	0.85	+0.0
1,045,632	+		ABIE51_RS04820	0.85	+1.3
1,045,633	-		ABIE51_RS04820	0.85	-0.5
1,045,633	-		ABIE51_RS04820	0.85	-0.2
1,045,633	-		ABIE51_RS04820	0.85	+1.0
1,045,866	+				+2.0
1,045,866	+				-1.1
1,045,867	-				+1.9
1,045,991	+				-1.0
1,046,002	+				-0.5
1,046,002	+				+0.3
1,046,026	+				-0.2
1,046,026	+				-1.1
1,046,026	+				-0.4
1,046,026	+				-1.8
1,046,182	+		ABIE51_RS04825	0.43	-0.4
1,046,182	+		ABIE51_RS04825	0.43	-2.1
1,046,182	+		ABIE51_RS04825	0.43	-1.3
1,046,182	+		ABIE51_RS04825	0.43	-0.6
1,046,183	-		ABIE51_RS04825	0.43	+0.0
1,046,183	-		ABIE51_RS04825	0.43	-1.0
1,046,183	-		ABIE51_RS04825	0.43	-0.3
1,046,183	-		ABIE51_RS04825	0.43	-0.2
1,046,183	-		ABIE51_RS04825	0.43	-1.0
1,046,206	+		ABIE51_RS04825	0.48	-1.6
1,046,206	+		ABIE51_RS04825	0.48	-1.4
1,046,326	+		ABIE51_RS04825	0.77	-1.8
1,046,326	+		ABIE51_RS04825	0.77	-1.0
1,046,326	+		ABIE51_RS04825	0.77	-0.4
1,046,326	+		ABIE51_RS04825	0.77	-1.0
1,046,326	+		ABIE51_RS04825	0.77	+0.6
1,046,326	+		ABIE51_RS04825	0.77	-2.0
1,046,327	-		ABIE51_RS04825	0.77	-2.6
1,046,327	-		ABIE51_RS04825	0.77	-1.0
1,046,327	-		ABIE51_RS04825	0.77	-2.0
1,046,327	-		ABIE51_RS04825	0.77	-1.3
1,046,327	-		ABIE51_RS04825	0.77	-0.4
1,046,335	+		ABIE51_RS04825	0.79	-1.0
1,046,402	+				-2.2
1,046,403	-				-1.6
1,046,423	+				-1.2
1,046,423	+				-2.4
1,046,424	-				-0.6
1,046,424	-				-1.3
1,046,424	-				+0.0
1,046,424	-				-0.8
1,046,443	+				-2.3
1,046,443	+				-0.6
1,046,447	+				-1.3
1,046,448	-				+0.4
1,046,520	+				-0.4
1,046,520	+				-0.2
1,046,520	+				+0.0
1,046,520	+				+0.5
1,046,520	+				-0.6
1,046,521	-				+0.1
1,046,521	-				+0.2
1,046,752	-				-0.8
1,046,752	-				+0.4
1,046,769	-				+1.1
1,046,771	+				+0.9
1,046,771	+				+0.0
1,046,772	-				+0.2
1,046,772	-				+0.4
1,046,772	-				-0.2
1,046,772	-				+0.7
1,047,014	+		ABIE51_RS04830	0.53	+0.0
1,047,014	+		ABIE51_RS04830	0.53	+0.7
1,047,014	+		ABIE51_RS04830	0.53	-1.1
1,047,014	+		ABIE51_RS04830	0.53	+0.1
1,047,014	+		ABIE51_RS04830	0.53	+0.2
1,047,014	+		ABIE51_RS04830	0.53	+2.4
1,047,014	+		ABIE51_RS04830	0.53	-0.2
1,047,015	-		ABIE51_RS04830	0.54	+0.5
1,047,015	-		ABIE51_RS04830	0.54	-0.6
1,047,015	-		ABIE51_RS04830	0.54	+0.3
1,047,015	-		ABIE51_RS04830	0.54	+0.4
1,047,064	+		ABIE51_RS04830	0.66	-0.3
1,047,064	+		ABIE51_RS04830	0.66	-0.2
1,047,064	+		ABIE51_RS04830	0.66	+0.0
1,047,065	-		ABIE51_RS04830	0.67	+0.0
1,047,098	-		ABIE51_RS04830	0.75	+0.0
1,047,098	-		ABIE51_RS04830	0.75	+0.0
1,047,368	+		ABIE51_RS04835	0.28	-0.7
1,047,368	+		ABIE51_RS04835	0.28	-0.7