Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS04780

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
1,033,603	+				+0.8
1,033,604	-				+0.7
1,033,604	-				-1.4
1,033,604	-				-0.4
1,033,604	-				+0.3
1,033,725	+				+2.0
1,033,731	+				+0.2
1,033,775	+				-0.7
1,033,783	+				+0.2
1,033,783	+				-0.2
1,033,783	+				-0.3
1,033,784	-				-0.5
1,033,784	-				+0.0
1,033,784	-				+0.3
1,033,805	+				+0.5
1,033,806	-				-1.5
1,033,916	+		ABIE51_RS04780	0.15	-1.7
1,033,917	-		ABIE51_RS04780	0.15	-0.7
1,033,917	-		ABIE51_RS04780	0.15	-1.6
1,033,917	-		ABIE51_RS04780	0.15	+0.2
1,033,917	-		ABIE51_RS04780	0.15	-1.2
1,033,917	-		ABIE51_RS04780	0.15	-0.6
1,034,307	+				-1.7
1,034,307	+				+0.8
1,034,308	-				-0.7
1,034,308	-				-0.4
1,034,308	-				-1.4
1,034,308	-				-0.7
1,034,308	-				-0.7
1,034,308	-				+1.9
1,034,308	-				+0.3
1,034,321	-				-1.1
1,034,367	+				-1.9
1,034,367	+				+0.3
1,034,368	-				-0.3
1,034,835	+		ABIE51_RS04785	0.58	-2.3
1,034,835	+		ABIE51_RS04785	0.58	-0.7
1,034,835	+		ABIE51_RS04785	0.58	-0.7
1,034,835	+		ABIE51_RS04785	0.58	-1.5
1,034,835	+		ABIE51_RS04785	0.58	+2.3
1,034,835	+		ABIE51_RS04785	0.58	-0.4
1,034,835	+		ABIE51_RS04785	0.58	-1.7
1,034,835	+		ABIE51_RS04785	0.58	-0.8
1,034,835	+		ABIE51_RS04785	0.58	-0.4
1,034,835	+		ABIE51_RS04785	0.58	-0.0
1,034,835	+		ABIE51_RS04785	0.58	-0.5
1,034,836	-		ABIE51_RS04785	0.58	+1.0
1,034,836	-		ABIE51_RS04785	0.58	-0.3
1,034,836	-		ABIE51_RS04785	0.58	-0.2
1,034,836	-		ABIE51_RS04785	0.58	-0.7
1,034,836	-		ABIE51_RS04785	0.58	-0.9
1,034,836	-		ABIE51_RS04785	0.58	-0.9
1,034,836	-		ABIE51_RS04785	0.58	-0.1
1,034,836	-		ABIE51_RS04785	0.58	+1.0
1,034,836	-		ABIE51_RS04785	0.58	-0.3
1,034,836	-		ABIE51_RS04785	0.58	+0.7
1,034,836	-		ABIE51_RS04785	0.58	-1.2
1,034,836	-		ABIE51_RS04785	0.58	-0.8
1,034,961	+		ABIE51_RS04785	0.71	-0.1
1,034,961	+		ABIE51_RS04785	0.71	-0.2
1,034,962	-		ABIE51_RS04785	0.72	-0.8
1,034,962	-		ABIE51_RS04785	0.72	-0.6
1,035,018	+		ABIE51_RS04785	0.78	-0.2
1,035,019	-		ABIE51_RS04785	0.78	+0.7
1,035,255	-				-0.5
1,035,255	-				-0.3
1,035,255	-				+0.7
1,035,255	-				-1.6
1,035,255	-				+0.3