Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS00690

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
142,005	-		ABIE51_RS00680	0.37	+0.4
142,208	+		ABIE51_RS00680	0.63	+1.0
142,334	+		ABIE51_RS00680	0.79	-1.1
142,334	+		ABIE51_RS00680	0.79	+0.9
142,523	+				-0.5
142,553	-				+0.1
142,559	-				+0.4
142,559	-				+0.8
142,812	+		ABIE51_RS00685	0.73	-1.5
142,813	-		ABIE51_RS00685	0.73	+0.3
142,813	-		ABIE51_RS00685	0.73	+0.3
142,853	+		ABIE51_RS00685	0.84	+0.5
142,854	-		ABIE51_RS00685	0.85	-0.8
142,854	-		ABIE51_RS00685	0.85	-1.4
142,904	+				+2.4
142,938	+				-1.2
142,938	+				-0.6
142,938	+				-0.7
142,938	+				-0.2
142,939	-				+0.7
143,520	+		ABIE51_RS00690	0.64	+0.2
143,521	-		ABIE51_RS00690	0.65	-0.0
143,521	-		ABIE51_RS00690	0.65	+0.4
143,607	+		ABIE51_RS00690	0.74	+1.0
143,608	-		ABIE51_RS00690	0.74	-0.7
143,814	+				+1.2
143,814	+				-0.1
143,999	+		ABIE51_RS00695	0.19	+0.8
144,000	-		ABIE51_RS00695	0.19	+1.0
144,000	-		ABIE51_RS00695	0.19	-0.6
144,060	-		ABIE51_RS00695	0.27	-0.2
144,060	-		ABIE51_RS00695	0.27	-0.8
144,137	+		ABIE51_RS00695	0.36	+0.6
144,452	+		ABIE51_RS00695	0.77	-0.9
144,452	+		ABIE51_RS00695	0.77	+0.2
144,512	+		ABIE51_RS00695	0.85	-2.8
144,513	-		ABIE51_RS00695	0.85	-2.4
144,513	-		ABIE51_RS00695	0.85	-1.0
144,752	+				-0.3