Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS18590

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
4,046,512	+		ABIE51_RS18580	0.38	-0.0
4,046,512	+		ABIE51_RS18580	0.38	+0.3
4,046,512	+		ABIE51_RS18580	0.38	+0.3
4,046,512	+		ABIE51_RS18580	0.38	+1.2
4,046,513	-		ABIE51_RS18580	0.38	-0.1
4,046,513	-		ABIE51_RS18580	0.38	-0.2
4,046,686	+		ABIE51_RS18580	0.61	-0.1
4,046,686	+		ABIE51_RS18580	0.61	-0.2
4,046,686	+		ABIE51_RS18580	0.61	+0.1
4,046,687	-		ABIE51_RS18580	0.61	+0.4
4,046,687	-		ABIE51_RS18580	0.61	+0.4
4,046,687	-		ABIE51_RS18580	0.61	+0.8
4,046,687	-		ABIE51_RS18580	0.61	+1.3
4,046,687	-		ABIE51_RS18580	0.61	-0.9
4,046,877	+		ABIE51_RS18580	0.86	-0.3
4,046,877	+		ABIE51_RS18580	0.86	+0.3
4,046,877	+		ABIE51_RS18580	0.86	-0.0
4,046,877	+		ABIE51_RS18580	0.86	-0.2
4,046,877	+		ABIE51_RS18580	0.86	-0.4
4,046,911	+				-0.1
4,046,912	-				+0.1
4,047,001	+				-1.0
4,047,002	-				+0.5
4,047,002	-				-0.0
4,047,002	-				+0.2
4,047,002	-				+0.3
4,047,002	-				-0.1
4,047,002	-				+1.1
4,047,002	-				-0.2
4,047,005	+				-1.0
4,047,005	+				+0.4
4,047,005	+				-0.6
4,047,006	-				+1.0
4,047,006	-				-1.6
4,047,006	-				+1.0
4,047,401	+				-0.0
4,047,435	-				-0.3
4,047,468	-				+0.5
4,047,468	-				+0.4
4,047,468	-				+0.7
4,047,488	+				-0.5
4,047,488	+				-0.0
4,047,488	+				-0.2
4,047,488	+				-0.0
4,047,489	-				-0.4
4,047,707	+				+1.0
4,047,707	+				-0.0
4,047,707	+				+0.2
4,047,707	+				-0.0
4,047,708	-				-0.0
4,047,708	-				-0.0
4,047,708	-				-1.4
4,047,709	+				+0.3
4,047,710	-				-0.6
4,047,710	-				-1.3
4,047,710	-				-0.8
4,047,710	-				-0.0
4,047,821	-				-0.3
4,047,891	+				+0.4
4,047,891	+				+1.0
4,047,891	+				-0.9
4,047,891	+				+0.4
4,047,891	+				+0.1
4,047,891	+				+2.0
4,047,892	-				-0.1
4,047,892	-				+0.2
4,047,892	-				-0.5
4,047,892	-				+1.0
4,047,920	+				+0.3
4,047,920	+				-0.6
4,047,921	-				-0.6
4,047,921	-				+0.4
4,047,921	-				+0.4
4,047,921	-				+0.2
4,047,943	+				-1.2
4,047,943	+				-0.1
4,047,943	+				-0.0
4,047,943	+				+0.7
4,047,943	+				+0.1
4,047,943	+				+0.4
4,047,943	+				-0.2
4,047,943	+				+2.6
4,047,944	-				-0.8
4,047,944	-				-0.5
4,047,944	-				+1.4
4,047,944	-				+0.2
4,047,944	-				-0.3
4,047,944	-				-0.6
4,047,944	-				-0.8
4,047,944	-				-0.5
4,047,944	-				+0.9
4,047,944	-				-0.0
4,047,944	-				-0.4
4,047,944	-				+2.0
4,047,944	-				-0.1
4,048,084	+		ABIE51_RS18595	0.53	+0.3
4,048,084	+		ABIE51_RS18595	0.53	-0.2
4,048,084	+		ABIE51_RS18595	0.53	+0.6
4,048,084	-		ABIE51_RS18595	0.53	+1.6
4,048,085	-		ABIE51_RS18595	0.53	+0.2
4,048,085	-		ABIE51_RS18595	0.53	-0.1
4,048,091	+		ABIE51_RS18595	0.55	-0.4
4,048,091	+		ABIE51_RS18595	0.55	-0.3
4,048,091	+		ABIE51_RS18595	0.55	+0.4
4,048,091	+		ABIE51_RS18595	0.55	-0.9
4,048,091	+		ABIE51_RS18595	0.55	-1.9
4,048,092	-		ABIE51_RS18595	0.55	-0.2
4,048,092	-		ABIE51_RS18595	0.55	+0.3
4,048,244	+				+0.8
4,048,244	+				+0.5
4,048,244	+				-0.0
4,048,244	+				+2.4
4,048,244	+				+0.7
4,048,244	+				-0.0
4,048,244	+				+0.7
4,048,244	+				-0.4
4,048,244	+				+0.5
4,048,244	+				+0.9
4,048,244	+				-0.1
4,048,244	+				+0.2
4,048,244	+				+0.1
4,048,245	-				-2.5
4,048,245	-				-0.8
4,048,245	-				+0.8
4,048,245	-				+0.4
4,048,245	-				+1.0
4,048,245	-				-0.1
4,048,245	-				+1.0
4,048,245	-				+0.1
4,048,245	-				-0.0
4,048,245	-				+1.5
4,048,245	-				-1.3
4,048,245	-				+0.9
4,048,429	+		ABIE51_RS18600	0.49	+0.1
4,048,429	+		ABIE51_RS18600	0.49	+1.0
4,048,429	+		ABIE51_RS18600	0.49	+0.6
4,048,429	+		ABIE51_RS18600	0.49	+0.4
4,048,429	+		ABIE51_RS18600	0.49	+0.3
4,048,429	+		ABIE51_RS18600	0.49	+1.6
4,048,429	+		ABIE51_RS18600	0.49	+0.8
4,048,429	+		ABIE51_RS18600	0.49	+2.0
4,048,429	+		ABIE51_RS18600	0.49	-1.0
4,048,429	+		ABIE51_RS18600	0.49	+0.5
4,048,429	+		ABIE51_RS18600	0.49	-0.9
4,048,430	-		ABIE51_RS18600	0.49	+0.2
4,048,430	-		ABIE51_RS18600	0.49	+0.2
4,048,430	-		ABIE51_RS18600	0.49	+0.4
4,048,430	-		ABIE51_RS18600	0.49	+0.0
4,048,430	-		ABIE51_RS18600	0.49	+0.4
4,048,430	-		ABIE51_RS18600	0.49	+0.5
4,048,430	-		ABIE51_RS18600	0.49	+1.6
4,048,430	-		ABIE51_RS18600	0.49	+0.8
4,048,555	+				-0.0
4,048,555	+				+0.1
4,048,556	-				-1.8
4,048,556	-				-0.6
4,048,577	+				+1.2
4,048,577	+				+0.4
4,048,578	-				+0.4
4,048,604	+				+0.5