Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS16540

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
3,595,965	-		ABIE51_RS16535	0.65	+0.1
3,595,965	-		ABIE51_RS16535	0.65	+0.4
3,595,979	+		ABIE51_RS16535	0.66	+0.4
3,595,979	+		ABIE51_RS16535	0.66	+0.5
3,595,979	+		ABIE51_RS16535	0.66	+0.4
3,596,078	+		ABIE51_RS16535	0.71	-0.3
3,596,078	+		ABIE51_RS16535	0.71	+0.3
3,596,078	+		ABIE51_RS16535	0.71	-0.3
3,596,078	+		ABIE51_RS16535	0.71	-0.4
3,596,079	-		ABIE51_RS16535	0.71	-2.9
3,596,079	-		ABIE51_RS16535	0.71	-1.1
3,596,079	-		ABIE51_RS16535	0.71	-0.5
3,596,079	-		ABIE51_RS16535	0.71	+0.1
3,596,079	-		ABIE51_RS16535	0.71	+0.9
3,596,079	-		ABIE51_RS16535	0.71	-0.7
3,596,079	-		ABIE51_RS16535	0.71	-0.2
3,596,079	-		ABIE51_RS16535	0.71	-0.8
3,596,210	+		ABIE51_RS16535	0.78	+0.2
3,596,210	+		ABIE51_RS16535	0.78	-1.0
3,596,210	+		ABIE51_RS16535	0.78	-0.4
3,596,210	+		ABIE51_RS16535	0.78	-0.2
3,596,211	-		ABIE51_RS16535	0.78	-0.2
3,596,211	-		ABIE51_RS16535	0.78	-1.1
3,596,211	-		ABIE51_RS16535	0.78	-3.8
3,596,252	+		ABIE51_RS16535	0.81	-0.7
3,596,252	+		ABIE51_RS16535	0.81	+0.1
3,596,253	-		ABIE51_RS16535	0.81	+0.2
3,596,342	+		ABIE51_RS16535	0.86	-0.2
3,596,342	+		ABIE51_RS16535	0.86	-1.0
3,596,342	+		ABIE51_RS16535	0.86	-0.6
3,596,342	+		ABIE51_RS16535	0.86	-0.0
3,596,342	+		ABIE51_RS16535	0.86	-0.0
3,596,342	+		ABIE51_RS16535	0.86	+0.1
3,596,342	+		ABIE51_RS16535	0.86	-0.0
3,596,342	+		ABIE51_RS16535	0.86	-0.4
3,596,343	-		ABIE51_RS16535	0.86	+0.3
3,596,343	-		ABIE51_RS16535	0.86	+0.6
3,596,343	-		ABIE51_RS16535	0.86	-0.1
3,596,343	-		ABIE51_RS16535	0.86	-0.2
3,596,343	-		ABIE51_RS16535	0.86	-1.4
3,596,343	-		ABIE51_RS16535	0.86	-0.9
3,596,489	+				-0.2
3,596,490	-				+0.3
3,596,534	+				-2.5
3,596,535	-				+0.4
3,596,535	-				-1.1
3,596,535	-				-0.1
3,596,674	+				-0.4
3,596,674	+				+0.6
3,596,674	+				-0.2
3,596,674	+				-0.5
3,596,674	+				-0.2
3,596,674	+				+0.3
3,596,674	+				+1.0
3,596,675	-				+1.6
3,596,675	-				+0.2
3,596,675	-				-0.1
3,596,678	+				+1.0
3,596,678	+				-0.4
3,596,678	+				+0.1
3,596,678	+				+0.2
3,596,678	+				+0.2
3,596,678	+				-0.5
3,596,678	+				+0.2
3,596,678	+				-0.2
3,596,678	+				+0.4
3,596,678	+				-0.5
3,596,679	-				+0.5
3,596,679	-				+0.5
3,596,679	-				-0.0
3,596,679	-				+0.0
3,596,679	-				-0.0
3,596,679	-				-0.0
3,596,679	-				+0.4
3,596,679	-				-0.3
3,596,679	-				-0.5
3,596,679	-				-0.1
3,596,679	-				+0.4
3,597,162	+				-0.1
3,597,163	-				+0.6
3,597,163	-				-0.2
3,597,163	-				+1.1
3,597,168	-				-2.9