Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5847

Experiment: LB no stress 48 hours

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB no stress 48 hours
6,662,320	+		Pf6N2E2_5846	0.59	+0.2
6,662,321	-		Pf6N2E2_5846	0.59	+0.3
6,662,323	+		Pf6N2E2_5846	0.59	+0.6
6,662,324	-		Pf6N2E2_5846	0.59	-2.4
6,662,324	-		Pf6N2E2_5846	0.59	+0.5
6,662,324	-		Pf6N2E2_5846	0.59	-1.9
6,662,377	+		Pf6N2E2_5846	0.63	-0.9
6,662,377	+		Pf6N2E2_5846	0.63	+0.7
6,662,378	-		Pf6N2E2_5846	0.63	+0.6
6,662,491	+		Pf6N2E2_5846	0.72	+0.5
6,662,491	+		Pf6N2E2_5846	0.72	-0.3
6,662,491	+		Pf6N2E2_5846	0.72	-0.1
6,662,491	+		Pf6N2E2_5846	0.72	+0.2
6,662,492	-		Pf6N2E2_5846	0.72	-1.0
6,662,492	-		Pf6N2E2_5846	0.72	+1.1
6,662,492	-		Pf6N2E2_5846	0.72	+0.3
6,662,492	-		Pf6N2E2_5846	0.72	-0.7
6,662,492	-		Pf6N2E2_5846	0.72	+0.1
6,662,492	-		Pf6N2E2_5846	0.72	+0.8
6,662,495	-		Pf6N2E2_5846	0.72	-0.1
6,662,495	-		Pf6N2E2_5846	0.72	+0.3
6,662,495	-		Pf6N2E2_5846	0.72	-0.8
6,662,495	-		Pf6N2E2_5846	0.72	+0.3
6,662,509	+		Pf6N2E2_5846	0.73	+0.7
6,662,510	-		Pf6N2E2_5846	0.73	-0.3
6,662,510	-		Pf6N2E2_5846	0.73	+0.1
6,662,522	+		Pf6N2E2_5846	0.74	+1.7
6,662,522	+		Pf6N2E2_5846	0.74	-0.0
6,662,522	+		Pf6N2E2_5846	0.74	+0.3
6,662,522	+		Pf6N2E2_5846	0.74	-0.9
6,662,522	+		Pf6N2E2_5846	0.74	+1.4
6,662,522	+		Pf6N2E2_5846	0.74	+0.5
6,662,522	+		Pf6N2E2_5846	0.74	+0.8
6,662,522	+		Pf6N2E2_5846	0.74	+2.2
6,662,523	-		Pf6N2E2_5846	0.74	-1.0
6,662,770	+				+0.5
6,662,770	+				-1.8
6,662,770	+				-1.1
6,662,771	-				+0.3
6,662,771	-				+1.0
6,662,771	-				-0.4
6,662,817	-				+0.1
6,662,871	+				+0.1
6,662,872	-				-0.2
6,662,872	-				+0.4
6,662,902	+				+0.6
6,662,903	-				-1.9
6,662,965	+				-1.0
6,662,968	+				-1.3
6,663,004	-				-0.4
6,663,008	-				-0.9
6,663,008	-				+0.5
6,663,035	-				-0.1
6,663,056	+				+0.7
6,663,056	+				+0.1
6,663,057	-				-0.6
6,663,192	+				-0.2
6,663,222	+				+0.4
6,663,222	+				+0.8
6,663,222	+				-0.6
6,663,222	+				+1.7
6,663,222	+				-0.5
6,663,222	+				+0.2
6,663,222	+				+0.5
6,663,222	+				+0.0
6,663,223	-				-1.0
6,663,223	-				+0.5
6,663,223	-				+0.3
6,663,226	+				+0.6
6,663,226	+				+0.3
6,663,226	+				-0.5
6,663,226	+				-1.7
6,663,226	+				+1.0
6,663,226	+				-0.6
6,663,227	-				-0.3
6,663,228	+				+0.4
6,663,228	+				-0.4
6,663,228	+				-0.6
6,663,228	+				+1.2
6,663,228	+				+2.0
6,663,228	+				+0.1
6,663,229	-				-0.1
6,663,229	-				+0.1
6,663,229	-				-1.3
6,663,276	+				-0.6
6,663,276	+				-1.5
6,663,276	+				+0.2
6,663,276	+				-0.3
6,663,276	+				+0.6
6,663,277	-				+1.1
6,663,449	+		Pf6N2E2_5847	0.20	+0.9
6,663,557	+		Pf6N2E2_5847	0.32	+2.6
6,663,591	-		Pf6N2E2_5847	0.36	+0.1
6,663,638	+		Pf6N2E2_5847	0.42	+0.3
6,663,756	-		Pf6N2E2_5847	0.56	+1.3
6,663,756	-		Pf6N2E2_5847	0.56	+0.9
6,663,921	-		Pf6N2E2_5847	0.75	-0.8
6,663,939	+		Pf6N2E2_5847	0.77	-0.3
6,663,939	+		Pf6N2E2_5847	0.77	+0.8
6,663,940	-		Pf6N2E2_5847	0.77	+1.2
6,664,064	-				+0.6
6,664,113	+				-2.1
6,664,114	-				+1.7
6,664,114	-				+0.1
6,664,134	-				-1.3
6,664,147	+				+0.9
6,664,147	+				+0.7
6,664,147	+				-0.5
6,664,234	+				-0.2
6,664,235	-				+2.7
6,664,240	+				+0.5
6,664,241	-				+1.4
6,664,241	-				-0.3
6,664,269	+				-0.1
6,664,270	-				+2.2
6,664,277	+				+0.6
6,664,280	+				-1.7
6,664,280	+				+0.5
6,664,280	+				+1.6
6,664,280	+				-1.5
6,664,280	+				-1.1
6,664,280	+				+0.6
6,664,281	-				-1.6
6,664,281	-				-0.0
6,664,281	-				+0.5
6,664,281	-				-0.8
6,664,283	+				-1.1
6,664,283	+				-1.7
6,664,283	+				+0.5
6,664,283	+				-2.1
6,664,283	+				+0.7
6,664,284	-				+0.6
6,664,284	-				+0.9
6,664,284	-				+0.8
6,664,315	+				-0.3
6,664,315	+				-0.6
6,664,315	+				+1.3
6,664,315	+				+0.2
6,664,316	-				-0.8
6,664,316	-				+0.2
6,664,320	+				+0.1
6,664,335	+				-2.5
6,664,335	+				+0.3
6,664,335	+				-0.8
6,664,354	+				-0.2
6,664,377	+				+0.1
6,664,377	+				+0.4
6,664,377	+				+0.4
6,664,377	+				-0.5
6,664,470	+		Pf6N2E2_5848	0.35	+0.7
6,664,470	+		Pf6N2E2_5848	0.35	+2.7
6,664,497	+		Pf6N2E2_5848	0.43	+0.6
6,664,553	+		Pf6N2E2_5848	0.61	+0.9
6,664,554	-		Pf6N2E2_5848	0.62	+4.1
6,664,605	+		Pf6N2E2_5848	0.78	-0.1
6,664,610	-		Pf6N2E2_5848	0.79	-1.1
6,664,692	+				+1.0
6,664,692	+				-0.4
6,664,815	+				+1.0
6,664,815	+				-0.9
6,664,815	+				+1.7
6,664,815	+				+0.8
6,664,815	+				+0.1
6,664,815	+				+1.0
6,664,816	-				-0.4
6,664,817	+				+1.0
6,664,817	+				-0.4
6,664,817	+				-0.3
6,664,818	-				+0.2
6,664,818	-				-0.5
6,664,818	-				-0.6
6,664,818	-				-0.1
6,664,818	-				-2.9
6,664,818	-				+0.8
6,664,818	-				-0.3
6,664,818	-				-1.3
6,664,818	-				+1.0
6,664,826	+				-0.6
6,664,862	+		Pf6N2E2_5849	0.12	+0.8
6,664,863	-		Pf6N2E2_5849	0.12	+0.5
6,664,863	-		Pf6N2E2_5849	0.12	-0.2
6,664,865	+		Pf6N2E2_5849	0.12	-0.7
6,664,865	+		Pf6N2E2_5849	0.12	+1.7
6,664,865	+		Pf6N2E2_5849	0.12	+0.0
6,664,866	-		Pf6N2E2_5849	0.12	-1.7
6,664,866	-		Pf6N2E2_5849	0.12	+0.7
6,664,922	+		Pf6N2E2_5849	0.15	+0.4
6,664,922	+		Pf6N2E2_5849	0.15	-0.6
6,664,923	-		Pf6N2E2_5849	0.15	-1.6
6,664,923	-		Pf6N2E2_5849	0.15	-0.3
6,664,923	-		Pf6N2E2_5849	0.15	+0.5
6,664,923	-		Pf6N2E2_5849	0.15	-0.3
6,664,991	+		Pf6N2E2_5849	0.19	-0.8
6,664,991	+		Pf6N2E2_5849	0.19	+0.5
6,664,992	-		Pf6N2E2_5849	0.19	-1.5
6,664,992	-		Pf6N2E2_5849	0.19	-0.6
6,665,053	+		Pf6N2E2_5849	0.23	-0.0
6,665,054	-		Pf6N2E2_5849	0.23	-1.1
6,665,063	-		Pf6N2E2_5849	0.24	-1.3
6,665,066	+		Pf6N2E2_5849	0.24	+0.7
6,665,066	+		Pf6N2E2_5849	0.24	-1.8
6,665,066	+		Pf6N2E2_5849	0.24	-0.6
6,665,066	+		Pf6N2E2_5849	0.24	-0.0
6,665,066	+		Pf6N2E2_5849	0.24	-0.1
6,665,066	+		Pf6N2E2_5849	0.24	-1.5
6,665,067	-		Pf6N2E2_5849	0.24	-1.3
6,665,067	-		Pf6N2E2_5849	0.24	+0.9
6,665,067	-		Pf6N2E2_5849	0.24	-0.1
6,665,067	-		Pf6N2E2_5849	0.24	+0.1
6,665,067	-		Pf6N2E2_5849	0.24	+1.1