Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3988

Experiment: m.b. Bacitracin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Bacitracin 0.1 mg/ml
47,604	+		Dshi_3987	0.41	-0.3
47,612	-		Dshi_3987	0.42	+0.5
47,612	-		Dshi_3987	0.42	+0.3
47,637	+		Dshi_3987	0.45	-0.1
47,645	-		Dshi_3987	0.45	-0.4
47,658	+		Dshi_3987	0.46	-1.1
47,658	+		Dshi_3987	0.46	+0.8
47,666	-		Dshi_3987	0.47	+1.5
47,674	+		Dshi_3987	0.48	-0.0
47,726	+		Dshi_3987	0.53	-0.8
47,727	-		Dshi_3987	0.53	+0.2
47,734	-		Dshi_3987	0.54	+0.1
47,736	+		Dshi_3987	0.54	-0.0
47,736	+		Dshi_3987	0.54	+0.9
47,736	+		Dshi_3987	0.54	+0.4
47,736	+		Dshi_3987	0.54	+0.2
47,736	+		Dshi_3987	0.54	+0.3
47,736	+		Dshi_3987	0.54	-0.8
47,736	+		Dshi_3987	0.54	-0.1
47,743	-		Dshi_3987	0.54	+0.4
47,744	-		Dshi_3987	0.55	-0.0
47,744	-		Dshi_3987	0.55	+0.2
47,747	-		Dshi_3987	0.55	-0.2
47,747	-		Dshi_3987	0.55	-0.4
47,749	+		Dshi_3987	0.55	-0.2
47,815	+		Dshi_3987	0.61	-0.7
47,827	+		Dshi_3987	0.62	-0.4
47,836	+		Dshi_3987	0.63	-0.2
47,859	+		Dshi_3987	0.65	+0.3
47,859	+		Dshi_3987	0.65	+1.1
47,859	+		Dshi_3987	0.65	-0.1
47,859	+		Dshi_3987	0.65	-0.1
47,859	+		Dshi_3987	0.65	+0.2
47,871	-		Dshi_3987	0.66	-0.8
47,895	-		Dshi_3987	0.69	-0.6
47,896	+		Dshi_3987	0.69	+0.1
47,900	-		Dshi_3987	0.69	+0.2
47,913	+		Dshi_3987	0.70	-0.0
47,920	+		Dshi_3987	0.71	-0.6
47,931	+		Dshi_3987	0.72	-0.7
47,931	+		Dshi_3987	0.72	-0.4
47,931	+		Dshi_3987	0.72	-1.0
47,931	+		Dshi_3987	0.72	-0.7
47,931	+		Dshi_3987	0.72	-0.8
47,931	+		Dshi_3987	0.72	+0.3
47,939	-		Dshi_3987	0.73	-0.3
47,939	-		Dshi_3987	0.73	-1.8
47,939	-		Dshi_3987	0.73	+0.2
47,939	-		Dshi_3987	0.73	+0.1
47,939	-		Dshi_3987	0.73	-1.2
47,946	-		Dshi_3987	0.74	+0.0
47,946	-		Dshi_3987	0.74	+0.0
47,981	+		Dshi_3987	0.77	-0.4
47,987	+		Dshi_3987	0.77	-0.9
47,987	+		Dshi_3987	0.77	-1.1
47,990	-		Dshi_3987	0.78	+0.1
48,019	-		Dshi_3987	0.80	-0.4
48,019	-		Dshi_3987	0.80	+1.8
48,040	+		Dshi_3987	0.82	-0.3
48,050	+		Dshi_3987	0.83	+0.6
48,050	+		Dshi_3987	0.83	-0.8
48,050	+		Dshi_3987	0.83	+0.5
48,050	+		Dshi_3987	0.83	-0.2
48,058	-		Dshi_3987	0.84	-0.3
48,058	-		Dshi_3987	0.84	+0.9
48,058	-		Dshi_3987	0.84	-3.1
48,058	-		Dshi_3987	0.84	+1.5
48,121	+				-0.2
48,181	+				-0.5
48,181	+				-0.2
48,189	-				+0.4
48,206	+				+1.6
48,214	-				+0.6
48,214	-				-0.9
48,219	-				-0.9
48,224	-				-1.0
48,225	+				-0.3
48,230	+				+1.8
48,233	-				-0.1
48,233	-				-0.3
48,238	-				-1.2
48,243	-				-1.1
48,248	+				-1.1
48,256	+				-0.1
48,256	+				-0.5
48,256	-				+0.4
48,256	-				-0.5
48,259	-				+0.0
48,261	+				-0.7
48,274	+				-0.5
48,279	+				+0.1
48,287	-				-0.0
48,307	+				-0.4
48,317	+				+0.5
48,325	-				-0.1
48,325	-				+0.5
48,325	-				-0.2
48,325	-				+0.0
48,325	-				+0.2
48,359	+				+0.0
48,397	-				-2.5
48,399	+				-0.3
48,399	+				-0.1
48,400	+				-0.1
48,400	+				-0.1
48,411	+				-0.2
48,411	+				-0.1
48,414	-				-0.4
48,419	-				-0.6
48,419	-				-0.4
48,419	-				+0.6
48,419	-				-0.9
48,443	+				-0.4
48,460	-				+0.2
48,464	-				+0.5
48,467	-				-0.7
48,490	+				+0.7
48,519	+				-0.2
48,526	+				-0.3
48,526	+				-0.6
48,531	-				-0.8
48,550	+				-0.2
48,555	-				-0.2
48,564	+				-0.5
48,564	+				-0.7
48,564	+				-0.5
48,566	+				+0.5
48,566	+				-0.4
48,566	+				-1.5
48,566	+				-0.5
48,568	+				+0.3
48,572	-				-0.3
48,574	-				-1.0
48,574	-				-0.3
48,574	-				+0.2
48,574	-				-0.1
48,586	-				-0.5
48,593	+				-0.2
48,594	-				+0.8
48,594	-				-0.5
48,611	+				+0.3
48,617	-				-1.4
48,617	-				+0.1
48,617	-				-0.3
48,617	-				-0.5
48,617	-				-0.6
48,619	-				-0.5
48,624	+				-0.2
48,654	+				-0.2
48,657	+				-0.5
48,662	-				-0.4
48,662	-				-1.0
48,664	-				-0.1
48,667	+				-0.5
48,667	+				-0.7
48,667	+				+0.6
48,700	+				+0.2
48,700	+				+0.2
48,702	+				+0.6
48,797	-		Dshi_3988	0.10	-0.6
48,808	-		Dshi_3988	0.11	-0.0
48,816	+		Dshi_3988	0.11	-0.2
48,833	+		Dshi_3988	0.12	-0.7
48,846	+		Dshi_3988	0.13	+0.4
48,846	+		Dshi_3988	0.13	-0.3
48,846	+		Dshi_3988	0.13	-0.5
48,846	+		Dshi_3988	0.13	-0.6
48,846	+		Dshi_3988	0.13	-0.5
48,846	+		Dshi_3988	0.13	-1.4
48,846	+		Dshi_3988	0.13	-0.0
48,846	+		Dshi_3988	0.13	-0.0
48,851	+		Dshi_3988	0.13	-1.5
48,857	+		Dshi_3988	0.13	-2.8
48,940	+		Dshi_3988	0.17	-0.3
48,948	-		Dshi_3988	0.18	-0.0
48,969	+		Dshi_3988	0.19	-0.7
48,988	+		Dshi_3988	0.20	-0.7
49,012	-		Dshi_3988	0.21	-0.7
49,048	+		Dshi_3988	0.23	-1.0
49,080	-		Dshi_3988	0.24	+0.1
49,086	+		Dshi_3988	0.24	-1.3
49,104	-		Dshi_3988	0.25	-1.3
49,196	-		Dshi_3988	0.30	+0.0
49,215	-		Dshi_3988	0.31	+0.2
49,215	-		Dshi_3988	0.31	-0.3
49,324	-		Dshi_3988	0.36	+1.0
49,360	-		Dshi_3988	0.38	-2.8
49,378	+		Dshi_3988	0.39	+1.0
49,418	+		Dshi_3988	0.41	-0.1
49,423	+		Dshi_3988	0.41	-2.7
49,438	+		Dshi_3988	0.42	-0.8
49,446	-		Dshi_3988	0.42	-0.6
49,446	-		Dshi_3988	0.42	-0.3
49,452	-		Dshi_3988	0.43	-0.2
49,453	+		Dshi_3988	0.43	-1.5
49,544	+		Dshi_3988	0.47	-0.2
49,552	-		Dshi_3988	0.48	-0.0
49,651	+		Dshi_3988	0.53	-0.5
49,667	+		Dshi_3988	0.53	+0.3
49,698	+		Dshi_3988	0.55	+0.1
49,739	+		Dshi_3988	0.57	-0.5
49,739	-		Dshi_3988	0.57	+0.0
49,795	+		Dshi_3988	0.60	-0.6
49,804	-		Dshi_3988	0.60	-0.9
49,812	+		Dshi_3988	0.61	-0.3
49,870	+		Dshi_3988	0.63	-0.0
49,878	-		Dshi_3988	0.64	+0.8
49,907	+		Dshi_3988	0.65	+0.1
50,039	-		Dshi_3988	0.72	+0.0
50,054	-		Dshi_3988	0.73	+0.2
50,054	-		Dshi_3988	0.73	-0.8
50,115	+		Dshi_3988	0.76	+0.2
50,116	-		Dshi_3988	0.76	-1.0
50,119	+		Dshi_3988	0.76	+0.2
50,319	+		Dshi_3988	0.86	-1.7
50,344	+		Dshi_3988	0.87	-0.8
50,346	+		Dshi_3988	0.87	+0.1
50,415	+				-0.1
50,433	+				+0.2
50,527	+				-0.4
50,700	+				+0.2
50,708	-				-0.0
50,708	-				+1.0
50,756	-				+1.0
50,925	-		Dshi_3989	0.14	-0.5
51,024	-		Dshi_3989	0.18	-1.0
51,156	-		Dshi_3989	0.24	+1.1
51,180	+		Dshi_3989	0.25	-0.2
51,190	+		Dshi_3989	0.25	+0.3
51,591	+		Dshi_3989	0.42	-1.7