Experiment: m.b. Bacitracin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3736 and Dshi_3737 overlap by 4 nucleotides Dshi_3737 and Dshi_3738 are separated by 311 nucleotides
Dshi_3736: Dshi_3736 - Integrase catalytic region (RefSeq), at 142,349 to 143,254
_3736
Dshi_3737: Dshi_3737 - transposase IS3/IS911 family protein (RefSeq), at 143,251 to 143,583
_3737
Dshi_3738: Dshi_3738 - transposase IS116/IS110/IS902 family protein (RefSeq), at 143,895 to 145,256
_3738
Position (kb)
143
144 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 142.252 kb on + strand at 142.252 kb on + strand at 142.252 kb on + strand at 142.254 kb on + strand at 142.254 kb on + strand at 142.254 kb on + strand at 142.254 kb on + strand at 142.254 kb on + strand at 142.254 kb on + strand at 142.254 kb on + strand at 142.254 kb on + strand at 142.260 kb on - strand at 142.262 kb on - strand at 142.262 kb on - strand at 142.262 kb on - strand at 142.262 kb on - strand at 142.270 kb on - strand at 142.297 kb on - strand at 142.314 kb on - strand at 142.336 kb on - strand at 142.341 kb on - strand at 142.342 kb on - strand at 142.343 kb on - strand at 143.639 kb on + strand at 143.646 kb on - strand at 143.646 kb on - strand at 143.687 kb on + strand at 143.689 kb on + strand at 143.701 kb on + strand at 143.702 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.712 kb on + strand at 143.714 kb on + strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.720 kb on - strand at 143.722 kb on - strand at 143.789 kb on - strand at 143.799 kb on + strand at 143.800 kb on + strand at 143.808 kb on - strand at 143.808 kb on - strand at 143.860 kb on + strand at 143.861 kb on + strand at 143.861 kb on + strand at 143.863 kb on - strand at 143.876 kb on - strand at 143.879 kb on + strand at 143.884 kb on + strand at 143.884 kb on + strand at 143.903 kb on + strand at 143.903 kb on + strand at 143.903 kb on + strand at 143.903 kb on + strand at 143.911 kb on - strand at 143.936 kb on + strand at 143.941 kb on + strand at 143.941 kb on + strand at 143.941 kb on + strand at 143.949 kb on - strand at 143.949 kb on - strand at 143.949 kb on - strand at 143.971 kb on + strand at 143.986 kb on - strand at 143.988 kb on + strand at 143.996 kb on + strand at 143.996 kb on - strand at 144.004 kb on - strand at 144.067 kb on + strand, within Dshi_3738 at 144.075 kb on - strand, within Dshi_3738 at 144.075 kb on - strand, within Dshi_3738 at 144.093 kb on - strand, within Dshi_3738 at 144.098 kb on - strand, within Dshi_3738 at 144.121 kb on + strand, within Dshi_3738 at 144.162 kb on - strand, within Dshi_3738 at 144.168 kb on - strand, within Dshi_3738 at 144.221 kb on - strand, within Dshi_3738 at 144.226 kb on + strand, within Dshi_3738 at 144.231 kb on - strand, within Dshi_3738 at 144.236 kb on - strand, within Dshi_3738 at 144.255 kb on + strand, within Dshi_3738 at 144.263 kb on - strand, within Dshi_3738 at 144.263 kb on - strand, within Dshi_3738 at 144.263 kb on - strand, within Dshi_3738 at 144.268 kb on - strand, within Dshi_3738 at 144.332 kb on + strand, within Dshi_3738 at 144.424 kb on - strand, within Dshi_3738 at 144.442 kb on - strand, within Dshi_3738 at 144.472 kb on + strand, within Dshi_3738 at 144.472 kb on + strand, within Dshi_3738 at 144.480 kb on - strand, within Dshi_3738 at 144.521 kb on - strand, within Dshi_3738 at 144.527 kb on + strand, within Dshi_3738 at 144.527 kb on + strand, within Dshi_3738 at 144.535 kb on - strand, within Dshi_3738 at 144.535 kb on - strand, within Dshi_3738 at 144.542 kb on + strand, within Dshi_3738 at 144.550 kb on - strand, within Dshi_3738 at 144.561 kb on + strand, within Dshi_3738
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.1 mg/ml remove 142,252 + -0.2 142,252 + +0.4 142,252 + -0.2 142,254 + -2.0 142,254 + +0.5 142,254 + -0.5 142,254 + -1.5 142,254 + -0.1 142,254 + -1.6 142,254 + -0.7 142,254 + +2.8 142,260 - -0.3 142,262 - -0.5 142,262 - +0.5 142,262 - -0.5 142,262 - +0.7 142,270 - -2.7 142,297 - -0.4 142,314 - -1.7 142,336 - -0.7 142,341 - -0.1 142,342 - +0.1 142,343 - -0.1 143,639 + -0.9 143,646 - -0.2 143,646 - +0.2 143,687 + -0.6 143,689 + -0.5 143,701 + +0.3 143,702 + -0.6 143,712 + +1.2 143,712 + -0.8 143,712 + -0.4 143,712 + +0.1 143,712 + +0.1 143,712 + -1.8 143,712 + -0.6 143,712 + +0.5 143,712 + -1.5 143,712 + -0.2 143,712 + +0.0 143,712 + +0.2 143,712 + -0.9 143,712 + -0.3 143,712 + -0.7 143,712 + +0.2 143,712 + +0.4 143,712 + -1.4 143,712 + -1.3 143,712 + -0.2 143,714 + +0.9 143,720 - -0.3 143,720 - -0.5 143,720 - -0.7 143,720 - -1.1 143,720 - +0.1 143,720 - +0.1 143,720 - -0.8 143,720 - +0.5 143,720 - -0.2 143,720 - -0.5 143,720 - -0.2 143,722 - -0.4 143,789 - +0.0 143,799 + -2.5 143,800 + -1.0 143,808 - -0.4 143,808 - -0.7 143,860 + -1.1 143,861 + -0.2 143,861 + -0.2 143,863 - -1.1 143,876 - +0.2 143,879 + -0.2 143,884 + -0.5 143,884 + -0.4 143,903 + -0.8 143,903 + +1.4 143,903 + +0.3 143,903 + -0.4 143,911 - -0.0 143,936 + -0.4 143,941 + -0.2 143,941 + +0.0 143,941 + -0.1 143,949 - -0.4 143,949 - +0.2 143,949 - -0.2 143,971 + +1.0 143,986 - +1.0 143,988 + +0.5 143,996 + -0.4 143,996 - +0.0 144,004 - -1.8 144,067 + Dshi_3738 0.13 -0.0 144,075 - Dshi_3738 0.13 -0.2 144,075 - Dshi_3738 0.13 +0.1 144,093 - Dshi_3738 0.15 -1.0 144,098 - Dshi_3738 0.15 -0.5 144,121 + Dshi_3738 0.17 -1.1 144,162 - Dshi_3738 0.20 -0.1 144,168 - Dshi_3738 0.20 -0.6 144,221 - Dshi_3738 0.24 -0.1 144,226 + Dshi_3738 0.24 -1.8 144,231 - Dshi_3738 0.25 +0.5 144,236 - Dshi_3738 0.25 -0.2 144,255 + Dshi_3738 0.26 -0.7 144,263 - Dshi_3738 0.27 -0.2 144,263 - Dshi_3738 0.27 -0.8 144,263 - Dshi_3738 0.27 -0.7 144,268 - Dshi_3738 0.27 +0.4 144,332 + Dshi_3738 0.32 -0.3 144,424 - Dshi_3738 0.39 +0.4 144,442 - Dshi_3738 0.40 -0.3 144,472 + Dshi_3738 0.42 -0.9 144,472 + Dshi_3738 0.42 -0.1 144,480 - Dshi_3738 0.43 -0.7 144,521 - Dshi_3738 0.46 -1.4 144,527 + Dshi_3738 0.46 +0.7 144,527 + Dshi_3738 0.46 -1.2 144,535 - Dshi_3738 0.47 -0.3 144,535 - Dshi_3738 0.47 -0.2 144,542 + Dshi_3738 0.48 -0.6 144,550 - Dshi_3738 0.48 +0.1 144,561 + Dshi_3738 0.49 -0.6
Or see this region's nucleotide sequence