Experiment: m.b. Bacitracin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3565 and Dshi_3566 are separated by 77 nucleotides Dshi_3566 and Dshi_3567 are separated by 227 nucleotides
Dshi_3565: Dshi_3565 - arginine biosynthesis bifunctional protein ArgJ (RefSeq), at 3,751,993 to 3,753,216
_3565
Dshi_3566: Dshi_3566 - PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq), at 3,753,294 to 3,754,136
_3566
Dshi_3567: Dshi_3567 - preprotein translocase, SecA subunit (RefSeq), at 3,754,364 to 3,757,090
_3567
Position (kb)
3753
3754
3755 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3752.310 kb on + strand, within Dshi_3565 at 3752.313 kb on - strand, within Dshi_3565 at 3752.521 kb on - strand, within Dshi_3565 at 3752.627 kb on - strand, within Dshi_3565 at 3753.041 kb on - strand, within Dshi_3565 at 3753.049 kb on + strand, within Dshi_3565 at 3753.231 kb on + strand at 3753.256 kb on + strand at 3753.267 kb on + strand at 3753.305 kb on - strand at 3753.318 kb on + strand at 3753.386 kb on - strand, within Dshi_3566 at 3753.386 kb on - strand, within Dshi_3566 at 3753.387 kb on + strand, within Dshi_3566 at 3753.426 kb on + strand, within Dshi_3566 at 3753.435 kb on - strand, within Dshi_3566 at 3753.510 kb on - strand, within Dshi_3566 at 3753.543 kb on - strand, within Dshi_3566 at 3753.682 kb on + strand, within Dshi_3566 at 3753.718 kb on - strand, within Dshi_3566 at 3753.763 kb on + strand, within Dshi_3566 at 3753.838 kb on + strand, within Dshi_3566 at 3753.869 kb on + strand, within Dshi_3566 at 3753.897 kb on - strand, within Dshi_3566 at 3753.964 kb on + strand, within Dshi_3566 at 3753.973 kb on + strand, within Dshi_3566 at 3753.995 kb on - strand, within Dshi_3566 at 3753.995 kb on - strand, within Dshi_3566 at 3754.046 kb on - strand, within Dshi_3566 at 3754.085 kb on + strand at 3754.088 kb on + strand at 3754.110 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.1 mg/ml remove 3,752,310 + Dshi_3565 0.26 -0.4 3,752,313 - Dshi_3565 0.26 +1.3 3,752,521 - Dshi_3565 0.43 +0.5 3,752,627 - Dshi_3565 0.52 +0.2 3,753,041 - Dshi_3565 0.86 -0.1 3,753,049 + Dshi_3565 0.86 +1.2 3,753,231 + -0.8 3,753,256 + -1.3 3,753,267 + -0.3 3,753,305 - +0.0 3,753,318 + -2.8 3,753,386 - Dshi_3566 0.11 -3.3 3,753,386 - Dshi_3566 0.11 +0.0 3,753,387 + Dshi_3566 0.11 -2.0 3,753,426 + Dshi_3566 0.16 -1.2 3,753,435 - Dshi_3566 0.17 -1.1 3,753,510 - Dshi_3566 0.26 -0.8 3,753,543 - Dshi_3566 0.30 -0.7 3,753,682 + Dshi_3566 0.46 -0.7 3,753,718 - Dshi_3566 0.50 -2.3 3,753,763 + Dshi_3566 0.56 -0.8 3,753,838 + Dshi_3566 0.65 -0.8 3,753,869 + Dshi_3566 0.68 -1.3 3,753,897 - Dshi_3566 0.72 -1.3 3,753,964 + Dshi_3566 0.79 -1.1 3,753,973 + Dshi_3566 0.81 -1.6 3,753,995 - Dshi_3566 0.83 -0.1 3,753,995 - Dshi_3566 0.83 -0.2 3,754,046 - Dshi_3566 0.89 -1.4 3,754,085 + -1.3 3,754,088 + -0.1 3,754,110 + -1.1
Or see this region's nucleotide sequence