Experiment: m.b. Bacitracin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2854 and Dshi_2855 are separated by 208 nucleotides Dshi_2855 and Dshi_2856 are separated by 114 nucleotides Dshi_2856 and Dshi_2857 are separated by 85 nucleotides
Dshi_2854: Dshi_2854 - phospholipid/glycerol acyltransferase (RefSeq), at 3,011,938 to 3,013,380
_2854
Dshi_2855: Dshi_2855 - methylmalonyl-CoA mutase, large subunit (RefSeq), at 3,013,589 to 3,015,562
_2855
Dshi_2856: Dshi_2856 - hypothetical protein (RefSeq), at 3,015,677 to 3,016,192
_2856
Dshi_2857: Dshi_2857 - hypothetical protein (RefSeq), at 3,016,278 to 3,016,748
_2857
Position (kb)
3013
3014
3015
3016 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3012.617 kb on + strand, within Dshi_2854 at 3012.651 kb on + strand, within Dshi_2854 at 3012.664 kb on + strand, within Dshi_2854 at 3012.706 kb on - strand, within Dshi_2854 at 3012.751 kb on - strand, within Dshi_2854 at 3012.805 kb on - strand, within Dshi_2854 at 3012.817 kb on + strand, within Dshi_2854 at 3012.955 kb on - strand, within Dshi_2854 at 3012.965 kb on - strand, within Dshi_2854 at 3012.996 kb on + strand, within Dshi_2854 at 3013.067 kb on + strand, within Dshi_2854 at 3013.073 kb on + strand, within Dshi_2854 at 3013.075 kb on - strand, within Dshi_2854 at 3013.112 kb on + strand, within Dshi_2854 at 3013.238 kb on + strand at 3013.368 kb on + strand at 3013.390 kb on + strand at 3013.638 kb on + strand at 3013.750 kb on + strand at 3013.966 kb on - strand, within Dshi_2855 at 3013.997 kb on + strand, within Dshi_2855 at 3013.998 kb on + strand, within Dshi_2855 at 3013.998 kb on + strand, within Dshi_2855 at 3014.005 kb on - strand, within Dshi_2855 at 3014.005 kb on - strand, within Dshi_2855 at 3014.142 kb on - strand, within Dshi_2855 at 3014.316 kb on - strand, within Dshi_2855 at 3014.502 kb on + strand, within Dshi_2855 at 3014.520 kb on + strand, within Dshi_2855 at 3014.525 kb on + strand, within Dshi_2855 at 3014.544 kb on + strand, within Dshi_2855 at 3014.638 kb on + strand, within Dshi_2855 at 3014.790 kb on + strand, within Dshi_2855 at 3014.877 kb on + strand, within Dshi_2855 at 3014.881 kb on + strand, within Dshi_2855 at 3014.889 kb on - strand, within Dshi_2855 at 3015.006 kb on - strand, within Dshi_2855 at 3015.014 kb on + strand, within Dshi_2855 at 3015.110 kb on - strand, within Dshi_2855 at 3015.193 kb on - strand, within Dshi_2855 at 3015.395 kb on - strand at 3015.680 kb on + strand at 3015.805 kb on - strand, within Dshi_2856 at 3016.023 kb on + strand, within Dshi_2856 at 3016.219 kb on + strand at 3016.231 kb on + strand at 3016.236 kb on + strand at 3016.237 kb on + strand at 3016.237 kb on + strand at 3016.419 kb on - strand, within Dshi_2857 at 3016.465 kb on + strand, within Dshi_2857 at 3016.511 kb on + strand, within Dshi_2857
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.1 mg/ml remove 3,012,617 + Dshi_2854 0.47 +0.5 3,012,651 + Dshi_2854 0.49 +0.1 3,012,664 + Dshi_2854 0.50 -2.1 3,012,706 - Dshi_2854 0.53 +0.2 3,012,751 - Dshi_2854 0.56 +0.8 3,012,805 - Dshi_2854 0.60 -1.0 3,012,817 + Dshi_2854 0.61 -0.1 3,012,955 - Dshi_2854 0.70 -0.3 3,012,965 - Dshi_2854 0.71 -1.0 3,012,996 + Dshi_2854 0.73 +0.6 3,013,067 + Dshi_2854 0.78 +1.1 3,013,073 + Dshi_2854 0.79 -1.9 3,013,075 - Dshi_2854 0.79 +0.0 3,013,112 + Dshi_2854 0.81 +0.6 3,013,238 + +0.3 3,013,368 + +0.6 3,013,390 + -0.3 3,013,638 + -2.4 3,013,750 + -0.9 3,013,966 - Dshi_2855 0.19 -3.3 3,013,997 + Dshi_2855 0.21 -3.2 3,013,998 + Dshi_2855 0.21 -2.8 3,013,998 + Dshi_2855 0.21 +2.2 3,014,005 - Dshi_2855 0.21 -2.6 3,014,005 - Dshi_2855 0.21 -4.4 3,014,142 - Dshi_2855 0.28 -0.7 3,014,316 - Dshi_2855 0.37 -1.3 3,014,502 + Dshi_2855 0.46 -0.3 3,014,520 + Dshi_2855 0.47 -1.5 3,014,525 + Dshi_2855 0.47 -1.0 3,014,544 + Dshi_2855 0.48 -1.3 3,014,638 + Dshi_2855 0.53 +0.3 3,014,790 + Dshi_2855 0.61 -4.0 3,014,877 + Dshi_2855 0.65 -2.0 3,014,881 + Dshi_2855 0.65 -1.7 3,014,889 - Dshi_2855 0.66 -1.0 3,015,006 - Dshi_2855 0.72 -2.2 3,015,014 + Dshi_2855 0.72 -1.5 3,015,110 - Dshi_2855 0.77 -2.4 3,015,193 - Dshi_2855 0.81 -2.5 3,015,395 - -2.0 3,015,680 + +0.3 3,015,805 - Dshi_2856 0.25 -0.5 3,016,023 + Dshi_2856 0.67 +0.1 3,016,219 + -0.6 3,016,231 + -0.7 3,016,236 + -0.2 3,016,237 + +0.7 3,016,237 + +0.5 3,016,419 - Dshi_2857 0.30 -0.3 3,016,465 + Dshi_2857 0.40 -0.0 3,016,511 + Dshi_2857 0.49 +0.1
Or see this region's nucleotide sequence