Experiment: m.b. Bacitracin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1656 and Dshi_1657 overlap by 4 nucleotides Dshi_1657 and Dshi_1658 overlap by 4 nucleotides Dshi_1658 and Dshi_1659 are separated by 22 nucleotides
Dshi_1656: Dshi_1656 - ABC-3 protein (RefSeq), at 1,722,176 to 1,723,027
_1656
Dshi_1657: Dshi_1657 - ABC-3 protein (RefSeq), at 1,723,024 to 1,723,923
_1657
Dshi_1658: Dshi_1658 - ABC transporter related (RefSeq), at 1,723,920 to 1,724,816
_1658
Dshi_1659: Dshi_1659 - periplasmic solute binding protein (RefSeq), at 1,724,839 to 1,725,729
_1659
Position (kb)
1723
1724
1725 Strain fitness (log2 ratio)
-1
0
1 at 1722.935 kb on - strand, within Dshi_1656 at 1722.942 kb on + strand at 1723.043 kb on - strand at 1723.043 kb on - strand at 1723.066 kb on - strand at 1723.078 kb on - strand at 1723.091 kb on + strand at 1723.114 kb on + strand at 1723.236 kb on + strand, within Dshi_1657 at 1723.288 kb on - strand, within Dshi_1657 at 1723.335 kb on + strand, within Dshi_1657 at 1723.432 kb on + strand, within Dshi_1657 at 1723.515 kb on + strand, within Dshi_1657 at 1723.653 kb on + strand, within Dshi_1657 at 1723.683 kb on + strand, within Dshi_1657 at 1723.709 kb on + strand, within Dshi_1657 at 1723.783 kb on - strand, within Dshi_1657 at 1723.815 kb on + strand, within Dshi_1657 at 1723.845 kb on - strand at 1723.847 kb on + strand at 1723.855 kb on - strand at 1723.942 kb on + strand at 1723.952 kb on + strand at 1723.967 kb on + strand at 1724.103 kb on + strand, within Dshi_1658 at 1724.130 kb on + strand, within Dshi_1658 at 1724.138 kb on - strand, within Dshi_1658 at 1724.197 kb on + strand, within Dshi_1658 at 1724.225 kb on - strand, within Dshi_1658 at 1724.497 kb on + strand, within Dshi_1658 at 1724.660 kb on - strand, within Dshi_1658 at 1724.684 kb on - strand, within Dshi_1658 at 1724.696 kb on - strand, within Dshi_1658 at 1724.761 kb on - strand at 1724.786 kb on - strand at 1724.857 kb on - strand at 1724.936 kb on - strand, within Dshi_1659 at 1724.944 kb on + strand, within Dshi_1659 at 1725.043 kb on + strand, within Dshi_1659 at 1725.098 kb on + strand, within Dshi_1659 at 1725.144 kb on + strand, within Dshi_1659 at 1725.159 kb on - strand, within Dshi_1659 at 1725.162 kb on - strand, within Dshi_1659 at 1725.176 kb on + strand, within Dshi_1659 at 1725.179 kb on - strand, within Dshi_1659 at 1725.179 kb on - strand, within Dshi_1659 at 1725.179 kb on - strand, within Dshi_1659 at 1725.217 kb on - strand, within Dshi_1659 at 1725.253 kb on + strand, within Dshi_1659 at 1725.379 kb on - strand, within Dshi_1659 at 1725.393 kb on + strand, within Dshi_1659 at 1725.679 kb on + strand at 1725.713 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.1 mg/ml remove 1,722,935 - Dshi_1656 0.89 +1.0 1,722,942 + +1.4 1,723,043 - +0.1 1,723,043 - -0.9 1,723,066 - +0.0 1,723,078 - +0.5 1,723,091 + +0.4 1,723,114 + +0.4 1,723,236 + Dshi_1657 0.24 +0.6 1,723,288 - Dshi_1657 0.29 -0.1 1,723,335 + Dshi_1657 0.35 +1.2 1,723,432 + Dshi_1657 0.45 +0.0 1,723,515 + Dshi_1657 0.55 +1.1 1,723,653 + Dshi_1657 0.70 +0.3 1,723,683 + Dshi_1657 0.73 +1.1 1,723,709 + Dshi_1657 0.76 +1.1 1,723,783 - Dshi_1657 0.84 +1.0 1,723,815 + Dshi_1657 0.88 +0.3 1,723,845 - +1.4 1,723,847 + +1.0 1,723,855 - +1.4 1,723,942 + -0.5 1,723,952 + +1.2 1,723,967 + +1.5 1,724,103 + Dshi_1658 0.20 +0.4 1,724,130 + Dshi_1658 0.23 -0.6 1,724,138 - Dshi_1658 0.24 +1.0 1,724,197 + Dshi_1658 0.31 +0.1 1,724,225 - Dshi_1658 0.34 +0.9 1,724,497 + Dshi_1658 0.64 +1.0 1,724,660 - Dshi_1658 0.82 +0.6 1,724,684 - Dshi_1658 0.85 -1.0 1,724,696 - Dshi_1658 0.87 +1.2 1,724,761 - -0.2 1,724,786 - +1.1 1,724,857 - +0.0 1,724,936 - Dshi_1659 0.11 +1.1 1,724,944 + Dshi_1659 0.12 +0.7 1,725,043 + Dshi_1659 0.23 +0.5 1,725,098 + Dshi_1659 0.29 +0.6 1,725,144 + Dshi_1659 0.34 +0.4 1,725,159 - Dshi_1659 0.36 +1.2 1,725,162 - Dshi_1659 0.36 +0.6 1,725,176 + Dshi_1659 0.38 +0.5 1,725,179 - Dshi_1659 0.38 +0.8 1,725,179 - Dshi_1659 0.38 +0.6 1,725,179 - Dshi_1659 0.38 +1.1 1,725,217 - Dshi_1659 0.42 +0.2 1,725,253 + Dshi_1659 0.46 +1.2 1,725,379 - Dshi_1659 0.61 -0.9 1,725,393 + Dshi_1659 0.62 +0.9 1,725,679 + +1.2 1,725,713 - +1.0
Or see this region's nucleotide sequence