Experiment: m.b. Bacitracin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1586 and Dshi_1587 are separated by 196 nucleotides Dshi_1587 and Dshi_1588 overlap by 10 nucleotides Dshi_1588 and Dshi_1589 overlap by 4 nucleotides
Dshi_1586: Dshi_1586 - trimethylamine methyltransferase (RefSeq), at 1,651,441 to 1,652,988
_1586
Dshi_1587: Dshi_1587 - GMP synthase, large subunit (RefSeq), at 1,653,185 to 1,654,747
_1587
Dshi_1588: Dshi_1588 - protein of unknown function DUF218 (RefSeq), at 1,654,738 to 1,655,379
_1588
Dshi_1589: Dshi_1589 - protein of unknown function DUF6 transmembrane (RefSeq), at 1,655,376 to 1,656,263
_1589
Position (kb)
1653
1654
1655 Strain fitness (log2 ratio)
-2
-1
0
1 at 1652.220 kb on - strand, within Dshi_1586 at 1652.227 kb on + strand, within Dshi_1586 at 1652.267 kb on - strand, within Dshi_1586 at 1652.308 kb on + strand, within Dshi_1586 at 1652.345 kb on - strand, within Dshi_1586 at 1652.581 kb on + strand, within Dshi_1586 at 1652.610 kb on + strand, within Dshi_1586 at 1652.639 kb on + strand, within Dshi_1586 at 1652.674 kb on + strand, within Dshi_1586 at 1652.763 kb on + strand, within Dshi_1586 at 1652.787 kb on - strand, within Dshi_1586 at 1652.912 kb on - strand at 1652.987 kb on + strand at 1652.995 kb on - strand at 1653.011 kb on - strand at 1654.878 kb on - strand, within Dshi_1588 at 1654.885 kb on - strand, within Dshi_1588 at 1655.005 kb on - strand, within Dshi_1588 at 1655.064 kb on + strand, within Dshi_1588 at 1655.088 kb on + strand, within Dshi_1588 at 1655.100 kb on + strand, within Dshi_1588 at 1655.118 kb on - strand, within Dshi_1588 at 1655.230 kb on - strand, within Dshi_1588 at 1655.340 kb on + strand at 1655.484 kb on - strand, within Dshi_1589 at 1655.493 kb on - strand, within Dshi_1589 at 1655.524 kb on + strand, within Dshi_1589 at 1655.532 kb on - strand, within Dshi_1589 at 1655.589 kb on - strand, within Dshi_1589 at 1655.649 kb on + strand, within Dshi_1589 at 1655.657 kb on - strand, within Dshi_1589
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.1 mg/ml remove 1,652,220 - Dshi_1586 0.50 -0.2 1,652,227 + Dshi_1586 0.51 -0.5 1,652,267 - Dshi_1586 0.53 -1.3 1,652,308 + Dshi_1586 0.56 -0.5 1,652,345 - Dshi_1586 0.58 +0.9 1,652,581 + Dshi_1586 0.74 -0.1 1,652,610 + Dshi_1586 0.76 -1.7 1,652,639 + Dshi_1586 0.77 +1.1 1,652,674 + Dshi_1586 0.80 -1.1 1,652,763 + Dshi_1586 0.85 -1.9 1,652,787 - Dshi_1586 0.87 +0.5 1,652,912 - -0.3 1,652,987 + -0.3 1,652,995 - +0.1 1,653,011 - -0.2 1,654,878 - Dshi_1588 0.22 -2.1 1,654,885 - Dshi_1588 0.23 -1.1 1,655,005 - Dshi_1588 0.42 -0.8 1,655,064 + Dshi_1588 0.51 -0.9 1,655,088 + Dshi_1588 0.55 -0.0 1,655,100 + Dshi_1588 0.56 -0.8 1,655,118 - Dshi_1588 0.59 -1.1 1,655,230 - Dshi_1588 0.77 -0.6 1,655,340 + -0.7 1,655,484 - Dshi_1589 0.12 -0.9 1,655,493 - Dshi_1589 0.13 +0.7 1,655,524 + Dshi_1589 0.17 -0.8 1,655,532 - Dshi_1589 0.18 -2.3 1,655,589 - Dshi_1589 0.24 -0.0 1,655,649 + Dshi_1589 0.31 -0.7 1,655,657 - Dshi_1589 0.32 -0.2
Or see this region's nucleotide sequence