Experiment: m.b. Bacitracin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0669 and Dshi_0670 are separated by 173 nucleotides Dshi_0670 and Dshi_0671 are separated by 490 nucleotides
Dshi_0669: Dshi_0669 - Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq), at 673,560 to 675,041
_0669
Dshi_0670: Dshi_0670 - Haloacid dehalogenase domain protein hydrolase (RefSeq), at 675,215 to 675,919
_0670
Dshi_0671: Dshi_0671 - methyltransferase small (RefSeq), at 676,410 to 677,411
_0671
Position (kb) 675
676 Strain fitness (log2 ratio) -1
0
1 at 675.099 kb on + strand at 675.280 kb on + strand at 675.310 kb on + strand, within Dshi_0670 at 675.415 kb on + strand, within Dshi_0670 at 675.438 kb on - strand, within Dshi_0670 at 675.443 kb on + strand, within Dshi_0670 at 675.635 kb on + strand, within Dshi_0670 at 675.643 kb on - strand, within Dshi_0670 at 675.655 kb on + strand, within Dshi_0670 at 675.843 kb on - strand, within Dshi_0670 at 675.899 kb on - strand at 675.935 kb on + strand at 675.950 kb on - strand at 676.079 kb on + strand at 676.082 kb on - strand at 676.104 kb on + strand at 676.118 kb on + strand at 676.126 kb on - strand at 676.161 kb on - strand at 676.232 kb on + strand at 676.263 kb on - strand at 676.286 kb on - strand at 676.318 kb on + strand at 676.406 kb on + strand at 676.406 kb on + strand at 676.457 kb on - strand at 676.468 kb on + strand at 676.484 kb on + strand at 676.645 kb on - strand, within Dshi_0671 at 676.832 kb on + strand, within Dshi_0671 at 676.869 kb on + strand, within Dshi_0671
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.1 mg/ml remove 675,099 + -1.1 675,280 + -0.3 675,310 + Dshi_0670 0.13 -1.0 675,415 + Dshi_0670 0.28 +0.4 675,438 - Dshi_0670 0.32 +0.3 675,443 + Dshi_0670 0.32 +1.5 675,635 + Dshi_0670 0.60 +0.5 675,643 - Dshi_0670 0.61 +1.0 675,655 + Dshi_0670 0.62 -0.1 675,843 - Dshi_0670 0.89 -0.0 675,899 - +0.5 675,935 + -0.3 675,950 - -0.1 676,079 + +0.7 676,082 - -0.9 676,104 + +0.3 676,118 + +1.6 676,126 - +0.2 676,161 - +0.8 676,232 + +0.5 676,263 - -0.5 676,286 - -0.5 676,318 + +0.6 676,406 + -0.3 676,406 + -0.1 676,457 - -0.3 676,468 + -0.9 676,484 + +0.3 676,645 - Dshi_0671 0.23 +0.6 676,832 + Dshi_0671 0.42 +0.2 676,869 + Dshi_0671 0.46 -1.4
Or see this region's nucleotide sequence