Experiment: m.b. Bacitracin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0656 and Dshi_0657 are separated by 1 nucleotides Dshi_0657 and Dshi_0658 overlap by 4 nucleotides
Dshi_0656: Dshi_0656 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 658,895 to 659,992
_0656
Dshi_0657: Dshi_0657 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 659,994 to 661,172
_0657
Dshi_0658: Dshi_0658 - ABC transporter related (RefSeq), at 661,169 to 662,770
_0658
Position (kb) 659
660
661
662 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 659.025 kb on - strand, within Dshi_0656 at 659.087 kb on + strand, within Dshi_0656 at 659.095 kb on - strand, within Dshi_0656 at 659.123 kb on + strand, within Dshi_0656 at 659.124 kb on + strand, within Dshi_0656 at 659.132 kb on - strand, within Dshi_0656 at 659.132 kb on - strand, within Dshi_0656 at 659.254 kb on + strand, within Dshi_0656 at 659.310 kb on + strand, within Dshi_0656 at 659.310 kb on + strand, within Dshi_0656 at 659.331 kb on + strand, within Dshi_0656 at 659.343 kb on - strand, within Dshi_0656 at 659.369 kb on + strand, within Dshi_0656 at 659.400 kb on + strand, within Dshi_0656 at 659.486 kb on + strand, within Dshi_0656 at 659.593 kb on - strand, within Dshi_0656 at 659.608 kb on - strand, within Dshi_0656 at 659.623 kb on - strand, within Dshi_0656 at 659.684 kb on + strand, within Dshi_0656 at 659.711 kb on + strand, within Dshi_0656 at 659.711 kb on + strand, within Dshi_0656 at 659.778 kb on - strand, within Dshi_0656 at 659.820 kb on + strand, within Dshi_0656 at 659.820 kb on + strand, within Dshi_0656 at 659.847 kb on - strand, within Dshi_0656 at 659.944 kb on - strand at 659.949 kb on - strand at 660.010 kb on - strand at 660.011 kb on + strand at 660.014 kb on - strand at 660.316 kb on + strand, within Dshi_0657 at 660.334 kb on + strand, within Dshi_0657 at 660.342 kb on - strand, within Dshi_0657 at 660.368 kb on + strand, within Dshi_0657 at 660.416 kb on + strand, within Dshi_0657 at 660.433 kb on - strand, within Dshi_0657 at 660.633 kb on + strand, within Dshi_0657 at 660.756 kb on - strand, within Dshi_0657 at 660.772 kb on - strand, within Dshi_0657 at 660.792 kb on + strand, within Dshi_0657 at 660.792 kb on + strand, within Dshi_0657 at 660.792 kb on + strand, within Dshi_0657 at 660.810 kb on - strand, within Dshi_0657 at 660.900 kb on + strand, within Dshi_0657 at 661.235 kb on - strand at 661.254 kb on + strand at 661.254 kb on + strand at 661.368 kb on - strand, within Dshi_0658 at 661.394 kb on - strand, within Dshi_0658 at 661.521 kb on + strand, within Dshi_0658 at 661.673 kb on - strand, within Dshi_0658 at 661.811 kb on - strand, within Dshi_0658 at 661.811 kb on - strand, within Dshi_0658 at 661.853 kb on - strand, within Dshi_0658 at 661.886 kb on + strand, within Dshi_0658 at 661.991 kb on - strand, within Dshi_0658 at 662.026 kb on + strand, within Dshi_0658 at 662.103 kb on + strand, within Dshi_0658 at 662.104 kb on - strand, within Dshi_0658 at 662.172 kb on + strand, within Dshi_0658
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.1 mg/ml remove 659,025 - Dshi_0656 0.12 -1.8 659,087 + Dshi_0656 0.17 -1.0 659,095 - Dshi_0656 0.18 -1.2 659,123 + Dshi_0656 0.21 -0.8 659,124 + Dshi_0656 0.21 -1.8 659,132 - Dshi_0656 0.22 -2.5 659,132 - Dshi_0656 0.22 -1.1 659,254 + Dshi_0656 0.33 -0.5 659,310 + Dshi_0656 0.38 -2.2 659,310 + Dshi_0656 0.38 -1.4 659,331 + Dshi_0656 0.40 -2.4 659,343 - Dshi_0656 0.41 -1.8 659,369 + Dshi_0656 0.43 +0.1 659,400 + Dshi_0656 0.46 -1.6 659,486 + Dshi_0656 0.54 -0.7 659,593 - Dshi_0656 0.64 -2.3 659,608 - Dshi_0656 0.65 -1.6 659,623 - Dshi_0656 0.66 -1.5 659,684 + Dshi_0656 0.72 -0.6 659,711 + Dshi_0656 0.74 -1.9 659,711 + Dshi_0656 0.74 -1.2 659,778 - Dshi_0656 0.80 -2.0 659,820 + Dshi_0656 0.84 -1.1 659,820 + Dshi_0656 0.84 -1.1 659,847 - Dshi_0656 0.87 -0.5 659,944 - -2.6 659,949 - -0.7 660,010 - -0.3 660,011 + +0.1 660,014 - +1.2 660,316 + Dshi_0657 0.27 -1.9 660,334 + Dshi_0657 0.29 -0.6 660,342 - Dshi_0657 0.30 -0.9 660,368 + Dshi_0657 0.32 -2.5 660,416 + Dshi_0657 0.36 -1.3 660,433 - Dshi_0657 0.37 -1.1 660,633 + Dshi_0657 0.54 -2.3 660,756 - Dshi_0657 0.65 -1.5 660,772 - Dshi_0657 0.66 -1.7 660,792 + Dshi_0657 0.68 -1.9 660,792 + Dshi_0657 0.68 -1.5 660,792 + Dshi_0657 0.68 -1.0 660,810 - Dshi_0657 0.69 -1.5 660,900 + Dshi_0657 0.77 -1.9 661,235 - -1.3 661,254 + -1.5 661,254 + -1.5 661,368 - Dshi_0658 0.12 -2.0 661,394 - Dshi_0658 0.14 -2.5 661,521 + Dshi_0658 0.22 -2.6 661,673 - Dshi_0658 0.31 -1.7 661,811 - Dshi_0658 0.40 +0.2 661,811 - Dshi_0658 0.40 -3.3 661,853 - Dshi_0658 0.43 -0.8 661,886 + Dshi_0658 0.45 -2.7 661,991 - Dshi_0658 0.51 -0.9 662,026 + Dshi_0658 0.53 +1.7 662,103 + Dshi_0658 0.58 -1.6 662,104 - Dshi_0658 0.58 -1.7 662,172 + Dshi_0658 0.63 -1.9
Or see this region's nucleotide sequence