Experiment: m.b. Bacitracin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0184 and Dshi_0185 are separated by 39 nucleotides Dshi_0185 and Dshi_0186 overlap by 4 nucleotides Dshi_0186 and Dshi_0187 are separated by 22 nucleotides
Dshi_0184: Dshi_0184 - hypothetical protein (RefSeq), at 186,252 to 186,704
_0184
Dshi_0185: Dshi_0185 - phosphatidate cytidylyltransferase (RefSeq), at 186,744 to 187,694
_0185
Dshi_0186: Dshi_0186 - phospholipid/glycerol acyltransferase (RefSeq), at 187,691 to 188,344
_0186
Dshi_0187: Dshi_0187 - Lysine exporter protein (LYSE/YGGA) (RefSeq), at 188,367 to 188,981
_0187
Position (kb)
187
188
189 Strain fitness (log2 ratio)
-1
0
1 at 186.741 kb on + strand at 186.749 kb on - strand at 186.749 kb on - strand at 186.855 kb on + strand, within Dshi_0185 at 186.952 kb on + strand, within Dshi_0185 at 186.952 kb on + strand, within Dshi_0185 at 186.977 kb on + strand, within Dshi_0185 at 187.004 kb on - strand, within Dshi_0185 at 187.065 kb on - strand, within Dshi_0185 at 187.140 kb on - strand, within Dshi_0185 at 187.325 kb on - strand, within Dshi_0185 at 187.330 kb on - strand, within Dshi_0185 at 187.335 kb on - strand, within Dshi_0185 at 187.352 kb on - strand, within Dshi_0185 at 187.543 kb on + strand, within Dshi_0185 at 187.774 kb on + strand at 187.806 kb on + strand, within Dshi_0186 at 187.814 kb on - strand, within Dshi_0186 at 188.180 kb on + strand, within Dshi_0186 at 188.411 kb on - strand at 188.618 kb on + strand, within Dshi_0187 at 188.818 kb on - strand, within Dshi_0187 at 188.911 kb on + strand, within Dshi_0187 at 188.918 kb on - strand, within Dshi_0187 at 189.014 kb on - strand at 189.044 kb on + strand at 189.052 kb on - strand at 189.075 kb on - strand at 189.145 kb on + strand at 189.152 kb on + strand at 189.160 kb on - strand at 189.169 kb on - strand at 189.172 kb on - strand at 189.172 kb on - strand at 189.172 kb on - strand at 189.179 kb on + strand at 189.218 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.1 mg/ml remove 186,741 + +0.2 186,749 - -0.4 186,749 - -0.1 186,855 + Dshi_0185 0.12 +0.7 186,952 + Dshi_0185 0.22 -0.1 186,952 + Dshi_0185 0.22 -1.1 186,977 + Dshi_0185 0.25 -0.8 187,004 - Dshi_0185 0.27 -0.5 187,065 - Dshi_0185 0.34 -0.8 187,140 - Dshi_0185 0.42 -0.2 187,325 - Dshi_0185 0.61 -1.7 187,330 - Dshi_0185 0.62 -0.7 187,335 - Dshi_0185 0.62 -1.4 187,352 - Dshi_0185 0.64 -0.3 187,543 + Dshi_0185 0.84 -0.0 187,774 + +1.3 187,806 + Dshi_0186 0.18 -1.1 187,814 - Dshi_0186 0.19 -0.2 188,180 + Dshi_0186 0.75 +0.5 188,411 - -0.0 188,618 + Dshi_0187 0.41 -0.6 188,818 - Dshi_0187 0.73 -0.4 188,911 + Dshi_0187 0.88 -0.5 188,918 - Dshi_0187 0.90 -1.2 189,014 - -0.7 189,044 + -0.3 189,052 - +0.6 189,075 - -1.0 189,145 + -1.3 189,152 + -0.9 189,160 - -1.6 189,169 - -1.2 189,172 - -0.2 189,172 - +0.4 189,172 - -0.3 189,179 + -1.0 189,218 - +0.4
Or see this region's nucleotide sequence