Experiment: m.b. Bacitracin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0021 and Dshi_0022 are separated by 22 nucleotides Dshi_0022 and Dshi_0023 are separated by 43 nucleotides Dshi_0023 and Dshi_0024 are separated by 94 nucleotides
Dshi_0020: Dshi_0020 - putative transcriptional regulator, CadC (RefSeq), at 25,297 to 26,019
_0020
Dshi_0021: Dshi_0021 - hypothetical protein (RefSeq), at 25,973 to 26,377
_0021
Dshi_0022: Dshi_0022 - hypothetical protein (RefSeq), at 26,400 to 26,954
_0022
Dshi_0023: Dshi_0023 - Ribonuclease H (RefSeq), at 26,998 to 27,618
_0023
Dshi_0024: Dshi_0024 - DNA methylase N-4/N-6 domain protein (RefSeq), at 27,713 to 28,819
_0024
Position (kb) 26
27
28 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 26.214 kb on - strand, within Dshi_0021 at 26.232 kb on - strand, within Dshi_0021 at 26.360 kb on + strand at 26.457 kb on - strand, within Dshi_0022 at 26.578 kb on - strand, within Dshi_0022 at 26.578 kb on - strand, within Dshi_0022 at 26.642 kb on + strand, within Dshi_0022 at 26.665 kb on + strand, within Dshi_0022 at 26.679 kb on - strand, within Dshi_0022 at 26.864 kb on - strand, within Dshi_0022 at 26.883 kb on + strand, within Dshi_0022 at 26.928 kb on - strand at 26.995 kb on + strand at 27.219 kb on + strand, within Dshi_0023 at 27.256 kb on - strand, within Dshi_0023 at 27.315 kb on - strand, within Dshi_0023 at 27.353 kb on + strand, within Dshi_0023 at 27.374 kb on - strand, within Dshi_0023 at 27.374 kb on - strand, within Dshi_0023 at 27.395 kb on - strand, within Dshi_0023 at 27.558 kb on - strand at 27.568 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.1 mg/ml remove 26,214 - Dshi_0021 0.60 -0.2 26,232 - Dshi_0021 0.64 +0.5 26,360 + +1.3 26,457 - Dshi_0022 0.10 +1.0 26,578 - Dshi_0022 0.32 +0.7 26,578 - Dshi_0022 0.32 +0.4 26,642 + Dshi_0022 0.44 +1.0 26,665 + Dshi_0022 0.48 +0.6 26,679 - Dshi_0022 0.50 -0.7 26,864 - Dshi_0022 0.84 -3.8 26,883 + Dshi_0022 0.87 -0.5 26,928 - -0.7 26,995 + -0.2 27,219 + Dshi_0023 0.36 -0.3 27,256 - Dshi_0023 0.42 -0.6 27,315 - Dshi_0023 0.51 -0.6 27,353 + Dshi_0023 0.57 -1.6 27,374 - Dshi_0023 0.61 -0.5 27,374 - Dshi_0023 0.61 -1.0 27,395 - Dshi_0023 0.64 -1.1 27,558 - +0.6 27,568 - -0.0
Or see this region's nucleotide sequence