Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_4030

Experiment: LB, pH8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB, pH8
4,150,169	+				-1.7
4,150,169	+				-0.1
4,150,169	+				-2.0
4,150,170	-				-0.1
4,150,170	-				-0.7
4,150,228	-				-1.1
4,150,269	+				-0.1
4,150,269	+				-1.7
4,150,269	+				+0.9
4,150,269	+				+0.9
4,150,274	+				+0.2
4,150,274	+				+0.1
4,150,274	+				+0.9
4,150,274	+				+1.0
4,150,275	-				-0.7
4,150,633	+				-0.9
4,150,660	+				-0.3
4,150,660	+				-0.5
4,150,716	-				-0.4
4,150,727	+				-0.7
4,150,736	+				+1.4
4,150,737	-				-3.3
4,150,737	-				+2.2
4,150,737	-				+1.7
4,150,746	-		Ga0059261_4029	0.11	+0.1
4,150,746	-		Ga0059261_4029	0.11	+0.6
4,150,818	-		Ga0059261_4029	0.34	+0.7
4,150,871	+		Ga0059261_4029	0.50	+1.4
4,150,872	-				-1.7
4,150,877	+		Ga0059261_4029	0.52	-0.3
4,150,952	+		Ga0059261_4029	0.76	-0.4
4,150,952	+		Ga0059261_4029	0.76	-0.4
4,150,952	+		Ga0059261_4029	0.76	-0.4
4,150,952	+		Ga0059261_4029	0.76	+0.1
4,150,952	+		Ga0059261_4029	0.76	-0.0
4,150,952	+		Ga0059261_4029	0.76	+0.7
4,150,953	-		Ga0059261_4029	0.76	-1.4
4,150,953	-		Ga0059261_4029	0.76	-0.4
4,150,955	+		Ga0059261_4029	0.77	-1.1
4,150,955	+		Ga0059261_4029	0.77	+1.4
4,150,955	+		Ga0059261_4029	0.77	-0.0
4,150,955	+		Ga0059261_4029	0.77	+0.7
4,150,956	-		Ga0059261_4029	0.77	-0.1
4,150,956	-		Ga0059261_4029	0.77	+0.4
4,151,011	+				-0.1
4,151,011	+				+0.9
4,151,011	+				-0.1
4,151,011	+				+0.3
4,151,012	-				+0.0
4,151,012	-				-0.2
4,151,047	+				-0.5
4,151,047	+				+0.4
4,151,047	+				+0.1
4,151,048	-				-0.4
4,151,115	+				+0.6
4,151,115	+				-0.1
4,151,116	-				+0.1
4,151,125	+				-0.6
4,151,126	-				-0.2
4,151,126	-				+1.6
4,151,152	+				+0.2
4,151,171	+				+0.2
4,151,171	+				+2.7
4,151,171	+				+1.2
4,151,171	+				+0.1
4,151,171	+				-1.7
4,151,171	+				-0.3
4,151,171	+				-0.1
4,151,172	-				-0.1
4,151,172	-				+0.4
4,151,172	-				+0.0
4,151,173	+				+0.0
4,151,173	+				-0.2
4,151,174	-				+0.9
4,151,174	-				+0.1
4,151,174	-				-0.9
4,151,174	-				-1.4
4,151,287	+		Ga0059261_4030	0.12	+0.7
4,151,287	+		Ga0059261_4030	0.12	+0.2
4,151,287	+		Ga0059261_4030	0.12	-0.4
4,151,287	+		Ga0059261_4030	0.12	+0.1
4,151,779	+		Ga0059261_4030	0.52	+2.9
4,151,779	+		Ga0059261_4030	0.52	+0.3
4,151,779	+		Ga0059261_4030	0.52	-2.1
4,151,779	+		Ga0059261_4030	0.52	-0.6
4,151,779	+		Ga0059261_4030	0.52	-0.1
4,151,779	+		Ga0059261_4030	0.52	+0.2
4,151,779	+		Ga0059261_4030	0.52	+0.3
4,151,780	-		Ga0059261_4030	0.52	-0.1
4,151,780	-		Ga0059261_4030	0.52	-0.7
4,151,780	-		Ga0059261_4030	0.52	-0.1
4,151,780	-		Ga0059261_4030	0.52	+0.4
4,151,780	-		Ga0059261_4030	0.52	-0.4
4,152,280	+				+0.0
4,152,280	+				-0.5
4,152,329	-				+0.2
4,152,329	-				+0.8
4,152,329	-				-0.0
4,152,329	-				-1.5
4,152,329	-				+1.3
4,152,329	-				-0.3
4,152,410	+				-0.2
4,152,423	-				+0.4
4,152,533	+				-0.4
4,152,533	+				-0.4
4,152,534	-				-1.5
4,152,534	-				-0.5
4,152,534	-				-0.8
4,152,582	-				-0.1
4,152,582	-				-0.1
4,152,582	-				+0.3
4,152,582	-				-0.7
4,152,740	+		Ga0059261_4031	0.19	-0.1
4,152,741	-		Ga0059261_4031	0.19	-1.1
4,152,741	-		Ga0059261_4031	0.19	-0.3
4,152,741	-		Ga0059261_4031	0.19	-2.1
4,152,741	-		Ga0059261_4031	0.19	+0.7
4,152,741	-		Ga0059261_4031	0.19	+1.0
4,152,779	+		Ga0059261_4031	0.22	-0.9
4,152,780	-		Ga0059261_4031	0.22	+0.1
4,152,805	-		Ga0059261_4031	0.23	-0.8
4,152,805	-		Ga0059261_4031	0.23	+0.2
4,152,805	-				+0.9
4,152,805	-		Ga0059261_4031	0.23	+0.1
4,152,913	+		Ga0059261_4031	0.30	+1.1
4,152,968	+		Ga0059261_4031	0.33	-0.1
4,152,968	+		Ga0059261_4031	0.33	+1.1
4,152,968	+		Ga0059261_4031	0.33	+0.2
4,152,968	+		Ga0059261_4031	0.33	+1.9
4,152,968	+		Ga0059261_4031	0.33	+0.0
4,152,968	+		Ga0059261_4031	0.33	-0.5
4,152,968	+		Ga0059261_4031	0.33	+0.6
4,152,969	-		Ga0059261_4031	0.33	-0.1
4,152,969	-		Ga0059261_4031	0.33	-1.1
4,152,969	-		Ga0059261_4031	0.33	-0.1
4,153,004	+		Ga0059261_4031	0.35	+0.3
4,153,005	-		Ga0059261_4031	0.35	+0.2
4,153,005	-		Ga0059261_4031	0.35	-0.3
4,153,005	-		Ga0059261_4031	0.35	-1.4
4,153,005	-		Ga0059261_4031	0.35	+0.6
4,153,019	+		Ga0059261_4031	0.36	+1.6
4,153,020	-		Ga0059261_4031	0.36	+1.1
4,153,020	-		Ga0059261_4031	0.36	+0.1
4,153,112	+		Ga0059261_4031	0.42	-0.2
4,153,112	+		Ga0059261_4031	0.42	+0.9
4,153,112	+		Ga0059261_4031	0.42	-1.1
4,153,113	-		Ga0059261_4031	0.42	-0.1
4,153,113	-		Ga0059261_4031	0.42	+0.6
4,153,113	-		Ga0059261_4031	0.42	+0.7
4,153,148	+		Ga0059261_4031	0.44	+0.1
4,153,149	-		Ga0059261_4031	0.44	+0.7
4,153,149	-		Ga0059261_4031	0.44	+0.1
4,153,149	-				+0.7
4,153,214	+		Ga0059261_4031	0.48	-0.1
4,153,214	+		Ga0059261_4031	0.48	-0.7
4,153,214	+		Ga0059261_4031	0.48	-0.7
4,153,214	+		Ga0059261_4031	0.48	-0.3
4,153,214	+		Ga0059261_4031	0.48	-0.1
4,153,214	+		Ga0059261_4031	0.48	-0.7
4,153,214	+		Ga0059261_4031	0.48	-0.5
4,153,214	+		Ga0059261_4031	0.48	+0.9
4,153,214	+		Ga0059261_4031	0.48	-0.4
4,153,214	+		Ga0059261_4031	0.48	+0.0
4,153,214	+		Ga0059261_4031	0.48	+0.1
4,153,215	-		Ga0059261_4031	0.48	+1.4
4,153,215	-		Ga0059261_4031	0.48	-0.6
4,153,215	-		Ga0059261_4031	0.48	-0.6
4,153,215	-		Ga0059261_4031	0.48	+2.0
4,153,215	-		Ga0059261_4031	0.48	+0.1
4,153,215	-		Ga0059261_4031	0.48	-0.8
4,153,215	-		Ga0059261_4031	0.48	+0.2
4,153,215	-		Ga0059261_4031	0.48	-0.1
4,153,348	-		Ga0059261_4031	0.56	+1.9