Experiment: LB, pH8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2140 and Ga0059261_2141 are separated by 180 nucleotides Ga0059261_2141 and Ga0059261_2142 are separated by 21 nucleotides Ga0059261_2142 and Ga0059261_2143 overlap by 1 nucleotides
Ga0059261_2140: Ga0059261_2140 - polyribonucleotide nucleotidyltransferase, at 2,253,020 to 2,255,374
_2140
Ga0059261_2141: Ga0059261_2141 - ribosomal protein S15, bacterial/organelle, at 2,255,555 to 2,255,824
_2141
Ga0059261_2142: Ga0059261_2142 - tRNA pseudouridine(55) synthase, at 2,255,846 to 2,256,760
_2142
Ga0059261_2143: Ga0059261_2143 - Zn-dependent proteases, at 2,256,760 to 2,257,452
_2143
Position (kb)
2255
2256 Strain fitness (log2 ratio)
-2
-1
0
1 at 2255.509 kb on - strand at 2255.509 kb on - strand at 2255.509 kb on - strand at 2255.509 kb on - strand at 2255.509 kb on - strand at 2255.593 kb on - strand, within Ga0059261_2141 at 2256.206 kb on - strand, within Ga0059261_2142 at 2256.207 kb on + strand, within Ga0059261_2142 at 2256.207 kb on + strand, within Ga0059261_2142 at 2256.207 kb on + strand, within Ga0059261_2142 at 2256.207 kb on + strand, within Ga0059261_2142 at 2256.207 kb on + strand, within Ga0059261_2142 at 2256.207 kb on + strand, within Ga0059261_2142 at 2256.207 kb on + strand, within Ga0059261_2142 at 2256.207 kb on + strand, within Ga0059261_2142 at 2256.207 kb on + strand, within Ga0059261_2142 at 2256.207 kb on + strand, within Ga0059261_2142 at 2256.207 kb on + strand, within Ga0059261_2142 at 2256.207 kb on + strand, within Ga0059261_2142 at 2256.207 kb on + strand, within Ga0059261_2142 at 2256.207 kb on + strand, within Ga0059261_2142 at 2256.207 kb on + strand, within Ga0059261_2142 at 2256.207 kb on + strand, within Ga0059261_2142 at 2256.208 kb on - strand, within Ga0059261_2142 at 2256.208 kb on - strand, within Ga0059261_2142 at 2256.208 kb on - strand, within Ga0059261_2142 at 2256.208 kb on - strand, within Ga0059261_2142 at 2256.208 kb on - strand, within Ga0059261_2142 at 2256.208 kb on - strand, within Ga0059261_2142 at 2256.208 kb on - strand, within Ga0059261_2142 at 2256.208 kb on - strand, within Ga0059261_2142 at 2256.208 kb on - strand, within Ga0059261_2142 at 2256.208 kb on - strand, within Ga0059261_2142 at 2256.208 kb on - strand, within Ga0059261_2142 at 2256.208 kb on - strand, within Ga0059261_2142 at 2256.208 kb on - strand, within Ga0059261_2142 at 2256.208 kb on - strand, within Ga0059261_2142 at 2256.208 kb on - strand, within Ga0059261_2142 at 2256.265 kb on + strand, within Ga0059261_2142 at 2256.266 kb on - strand, within Ga0059261_2142 at 2256.266 kb on - strand, within Ga0059261_2142 at 2256.280 kb on + strand, within Ga0059261_2142 at 2256.301 kb on + strand, within Ga0059261_2142 at 2256.301 kb on + strand, within Ga0059261_2142 at 2256.301 kb on + strand, within Ga0059261_2142 at 2256.302 kb on - strand at 2256.302 kb on - strand, within Ga0059261_2142 at 2256.302 kb on - strand, within Ga0059261_2142 at 2256.351 kb on + strand, within Ga0059261_2142 at 2256.351 kb on + strand, within Ga0059261_2142 at 2256.351 kb on + strand, within Ga0059261_2142 at 2256.351 kb on + strand, within Ga0059261_2142 at 2256.351 kb on + strand, within Ga0059261_2142 at 2256.351 kb on + strand, within Ga0059261_2142 at 2256.352 kb on - strand, within Ga0059261_2142 at 2256.352 kb on - strand, within Ga0059261_2142 at 2256.352 kb on - strand, within Ga0059261_2142 at 2256.352 kb on - strand, within Ga0059261_2142 at 2256.384 kb on + strand, within Ga0059261_2142 at 2256.384 kb on + strand, within Ga0059261_2142 at 2256.384 kb on + strand, within Ga0059261_2142 at 2256.384 kb on + strand, within Ga0059261_2142 at 2256.384 kb on + strand, within Ga0059261_2142 at 2256.385 kb on - strand, within Ga0059261_2142 at 2256.385 kb on - strand, within Ga0059261_2142 at 2256.385 kb on - strand, within Ga0059261_2142 at 2256.395 kb on + strand, within Ga0059261_2142 at 2256.396 kb on - strand, within Ga0059261_2142 at 2256.396 kb on - strand, within Ga0059261_2142 at 2256.396 kb on - strand, within Ga0059261_2142 at 2256.396 kb on - strand, within Ga0059261_2142 at 2256.456 kb on + strand, within Ga0059261_2142 at 2256.457 kb on - strand, within Ga0059261_2142 at 2256.457 kb on - strand, within Ga0059261_2142 at 2256.457 kb on - strand, within Ga0059261_2142 at 2256.458 kb on + strand, within Ga0059261_2142 at 2256.458 kb on + strand, within Ga0059261_2142 at 2256.458 kb on + strand, within Ga0059261_2142 at 2256.458 kb on + strand, within Ga0059261_2142 at 2256.459 kb on - strand, within Ga0059261_2142 at 2256.459 kb on - strand, within Ga0059261_2142 at 2256.459 kb on - strand, within Ga0059261_2142 at 2256.459 kb on - strand, within Ga0059261_2142 at 2256.459 kb on - strand, within Ga0059261_2142 at 2256.475 kb on + strand, within Ga0059261_2142 at 2256.476 kb on - strand, within Ga0059261_2142 at 2256.476 kb on - strand, within Ga0059261_2142 at 2256.476 kb on - strand, within Ga0059261_2142 at 2256.526 kb on + strand, within Ga0059261_2142 at 2256.527 kb on - strand, within Ga0059261_2142 at 2256.791 kb on + strand at 2256.791 kb on + strand at 2256.791 kb on + strand at 2256.791 kb on + strand at 2256.791 kb on + strand at 2256.791 kb on + strand at 2256.791 kb on + strand at 2256.791 kb on + strand at 2256.791 kb on + strand at 2256.791 kb on + strand at 2256.791 kb on + strand at 2256.791 kb on + strand at 2256.792 kb on - strand at 2256.792 kb on - strand at 2256.792 kb on - strand at 2256.792 kb on - strand at 2256.792 kb on - strand at 2256.792 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH8 remove 2,255,509 - -0.6 2,255,509 - -0.2 2,255,509 - +0.4 2,255,509 - -0.0 2,255,509 - -0.2 2,255,593 - Ga0059261_2141 0.14 -2.6 2,256,206 - Ga0059261_2142 0.39 +0.5 2,256,207 + Ga0059261_2142 0.39 +0.1 2,256,207 + Ga0059261_2142 0.39 +0.2 2,256,207 + Ga0059261_2142 0.39 -0.6 2,256,207 + Ga0059261_2142 0.39 +0.2 2,256,207 + Ga0059261_2142 0.39 -0.0 2,256,207 + Ga0059261_2142 0.39 +0.7 2,256,207 + Ga0059261_2142 0.39 -1.9 2,256,207 + Ga0059261_2142 0.39 +0.8 2,256,207 + Ga0059261_2142 0.39 +0.2 2,256,207 + Ga0059261_2142 0.39 +0.0 2,256,207 + Ga0059261_2142 0.39 -0.3 2,256,207 + Ga0059261_2142 0.39 -0.2 2,256,207 + Ga0059261_2142 0.39 +0.2 2,256,207 + Ga0059261_2142 0.39 -2.3 2,256,207 + Ga0059261_2142 0.39 +0.2 2,256,207 + Ga0059261_2142 0.39 -1.4 2,256,208 - Ga0059261_2142 0.40 +0.8 2,256,208 - Ga0059261_2142 0.40 +0.1 2,256,208 - Ga0059261_2142 0.40 -1.5 2,256,208 - Ga0059261_2142 0.40 +1.0 2,256,208 - Ga0059261_2142 0.40 -0.3 2,256,208 - Ga0059261_2142 0.40 +0.2 2,256,208 - Ga0059261_2142 0.40 +0.0 2,256,208 - Ga0059261_2142 0.40 -0.3 2,256,208 - Ga0059261_2142 0.40 +0.1 2,256,208 - Ga0059261_2142 0.40 -0.7 2,256,208 - Ga0059261_2142 0.40 -0.8 2,256,208 - Ga0059261_2142 0.40 +0.2 2,256,208 - Ga0059261_2142 0.40 -0.1 2,256,208 - Ga0059261_2142 0.40 +0.2 2,256,208 - Ga0059261_2142 0.40 -0.0 2,256,265 + Ga0059261_2142 0.46 +0.2 2,256,266 - Ga0059261_2142 0.46 -0.6 2,256,266 - Ga0059261_2142 0.46 +0.2 2,256,280 + Ga0059261_2142 0.47 -0.3 2,256,301 + Ga0059261_2142 0.50 -0.8 2,256,301 + Ga0059261_2142 0.50 +0.2 2,256,301 + Ga0059261_2142 0.50 +0.9 2,256,302 - +0.2 2,256,302 - Ga0059261_2142 0.50 +0.4 2,256,302 - Ga0059261_2142 0.50 +0.4 2,256,351 + Ga0059261_2142 0.55 +0.0 2,256,351 + Ga0059261_2142 0.55 +1.2 2,256,351 + Ga0059261_2142 0.55 +0.4 2,256,351 + Ga0059261_2142 0.55 -1.3 2,256,351 + Ga0059261_2142 0.55 +0.2 2,256,351 + Ga0059261_2142 0.55 -2.2 2,256,352 - Ga0059261_2142 0.55 -0.3 2,256,352 - Ga0059261_2142 0.55 -0.4 2,256,352 - Ga0059261_2142 0.55 -0.1 2,256,352 - Ga0059261_2142 0.55 +0.2 2,256,384 + Ga0059261_2142 0.59 +0.6 2,256,384 + Ga0059261_2142 0.59 +0.2 2,256,384 + Ga0059261_2142 0.59 +0.5 2,256,384 + Ga0059261_2142 0.59 +0.2 2,256,384 + Ga0059261_2142 0.59 +1.5 2,256,385 - Ga0059261_2142 0.59 -1.2 2,256,385 - Ga0059261_2142 0.59 +0.9 2,256,385 - Ga0059261_2142 0.59 -0.5 2,256,395 + Ga0059261_2142 0.60 -0.2 2,256,396 - Ga0059261_2142 0.60 -1.5 2,256,396 - Ga0059261_2142 0.60 -0.5 2,256,396 - Ga0059261_2142 0.60 +0.2 2,256,396 - Ga0059261_2142 0.60 +0.1 2,256,456 + Ga0059261_2142 0.67 +0.0 2,256,457 - Ga0059261_2142 0.67 -0.9 2,256,457 - Ga0059261_2142 0.67 -0.4 2,256,457 - Ga0059261_2142 0.67 -0.1 2,256,458 + Ga0059261_2142 0.67 +0.5 2,256,458 + Ga0059261_2142 0.67 +0.4 2,256,458 + Ga0059261_2142 0.67 +0.4 2,256,458 + Ga0059261_2142 0.67 -0.7 2,256,459 - Ga0059261_2142 0.67 -0.6 2,256,459 - Ga0059261_2142 0.67 -0.4 2,256,459 - Ga0059261_2142 0.67 +0.5 2,256,459 - Ga0059261_2142 0.67 -0.1 2,256,459 - Ga0059261_2142 0.67 +1.0 2,256,475 + Ga0059261_2142 0.69 +0.7 2,256,476 - Ga0059261_2142 0.69 +0.7 2,256,476 - Ga0059261_2142 0.69 +0.2 2,256,476 - Ga0059261_2142 0.69 -0.5 2,256,526 + Ga0059261_2142 0.74 -0.6 2,256,527 - Ga0059261_2142 0.74 -0.3 2,256,791 + +0.5 2,256,791 + -0.9 2,256,791 + +0.4 2,256,791 + +0.8 2,256,791 + -0.1 2,256,791 + -0.0 2,256,791 + -0.2 2,256,791 + -0.1 2,256,791 + -0.8 2,256,791 + +0.2 2,256,791 + -0.1 2,256,791 + +0.2 2,256,792 - +1.0 2,256,792 - +0.1 2,256,792 - -0.2 2,256,792 - -0.6 2,256,792 - +0.2 2,256,792 - -1.3
Or see this region's nucleotide sequence