Experiment: m.b. Phosphomycin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_4216 and Dshi_4217 are separated by 3 nucleotides Dshi_4217 and Dshi_4218 are separated by 126 nucleotides
Dshi_4216: Dshi_4216 - ABC-1 domain protein (RefSeq), at 63,812 to 65,134
_4216
Dshi_4217: Dshi_4217 - transcriptional regulator, LacI family (RefSeq), at 65,138 to 66,145
_4217
Dshi_4218: Dshi_4218 - hypothetical protein (RefSeq), at 66,272 to 67,225
_4218
Position (kb) 65
66
67 Strain fitness (log2 ratio) -1
0
1 at 64.391 kb on - strand, within Dshi_4216 at 64.488 kb on - strand, within Dshi_4216 at 64.510 kb on + strand, within Dshi_4216 at 64.520 kb on + strand, within Dshi_4216 at 64.590 kb on - strand, within Dshi_4216 at 64.612 kb on + strand, within Dshi_4216 at 64.636 kb on - strand, within Dshi_4216 at 64.705 kb on + strand, within Dshi_4216 at 64.713 kb on - strand, within Dshi_4216 at 64.758 kb on + strand, within Dshi_4216 at 64.758 kb on + strand, within Dshi_4216 at 64.841 kb on - strand, within Dshi_4216 at 64.900 kb on + strand, within Dshi_4216 at 65.032 kb on + strand at 65.055 kb on + strand at 65.085 kb on - strand at 65.143 kb on - strand at 65.179 kb on - strand at 65.320 kb on + strand, within Dshi_4217 at 65.659 kb on - strand, within Dshi_4217 at 65.747 kb on + strand, within Dshi_4217 at 66.109 kb on - strand at 66.321 kb on - strand at 66.631 kb on - strand, within Dshi_4218 at 66.647 kb on - strand, within Dshi_4218 at 66.686 kb on - strand, within Dshi_4218 at 66.753 kb on - strand, within Dshi_4218 at 66.837 kb on + strand, within Dshi_4218 at 66.856 kb on - strand, within Dshi_4218 at 67.047 kb on - strand, within Dshi_4218
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 0.005 mg/ml remove 64,391 - Dshi_4216 0.44 +0.2 64,488 - Dshi_4216 0.51 -0.2 64,510 + Dshi_4216 0.53 -1.5 64,520 + Dshi_4216 0.54 +0.1 64,590 - Dshi_4216 0.59 -0.1 64,612 + Dshi_4216 0.60 -0.7 64,636 - Dshi_4216 0.62 -0.3 64,705 + Dshi_4216 0.67 -0.1 64,713 - Dshi_4216 0.68 -0.8 64,758 + Dshi_4216 0.72 -0.2 64,758 + Dshi_4216 0.72 -0.1 64,841 - Dshi_4216 0.78 +0.3 64,900 + Dshi_4216 0.82 -0.2 65,032 + +0.6 65,055 + +0.5 65,085 - +0.4 65,143 - +0.7 65,179 - -0.9 65,320 + Dshi_4217 0.18 -1.4 65,659 - Dshi_4217 0.52 -1.0 65,747 + Dshi_4217 0.60 -1.0 66,109 - +0.9 66,321 - +1.1 66,631 - Dshi_4218 0.38 -0.5 66,647 - Dshi_4218 0.39 +0.5 66,686 - Dshi_4218 0.43 +1.1 66,753 - Dshi_4218 0.50 +0.0 66,837 + Dshi_4218 0.59 +0.2 66,856 - Dshi_4218 0.61 -0.7 67,047 - Dshi_4218 0.81 +0.1
Or see this region's nucleotide sequence