Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3556

Experiment: m.b. Phosphomycin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Phosphomycin 0.005 mg/ml
3,738,989	+		Dshi_3554	0.16	+0.0
3,739,020	-		Dshi_3554	0.21	-1.0
3,739,030	-		Dshi_3554	0.22	+0.2
3,739,119	-		Dshi_3554	0.35	-0.5
3,739,193	-		Dshi_3554	0.46	-0.0
3,739,208	-		Dshi_3554	0.48	-0.8
3,739,220	+		Dshi_3554	0.50	-1.0
3,739,264	+		Dshi_3554	0.56	-0.5
3,739,304	-		Dshi_3554	0.62	+0.7
3,739,321	+		Dshi_3554	0.64	-0.8
3,739,337	-		Dshi_3554	0.67	+0.5
3,739,366	-		Dshi_3554	0.71	-0.1
3,739,389	-		Dshi_3554	0.74	-1.1
3,739,426	+		Dshi_3554	0.79	+0.6
3,739,426	+		Dshi_3554	0.79	+0.1
3,739,426	+		Dshi_3554	0.79	-0.7
3,739,434	-		Dshi_3554	0.81	+1.5
3,739,434	-		Dshi_3554	0.81	+0.9
3,739,513	+				+0.7
3,739,513	+				+0.5
3,739,582	+				-1.2
3,739,605	+				+0.2
3,739,608	-				+0.7
3,739,629	+				-0.1
3,739,634	+				-1.0
3,739,642	-				-0.5
3,739,642	-				-1.8
3,739,649	-				+2.2
3,739,651	+				-0.1
3,739,723	+		Dshi_3555	0.14	-0.4
3,739,731	-		Dshi_3555	0.17	-0.3
3,739,731	-		Dshi_3555	0.17	-0.8
3,739,731	-		Dshi_3555	0.17	+1.2
3,739,747	-		Dshi_3555	0.23	+0.2
3,739,779	-		Dshi_3555	0.36	+0.8
3,739,779	-		Dshi_3555	0.36	+1.2
3,739,780	-		Dshi_3555	0.36	+0.1
3,739,792	-		Dshi_3555	0.41	-1.8
3,739,811	-		Dshi_3555	0.48	-1.1
3,739,814	-		Dshi_3555	0.49	-0.4
3,739,837	+		Dshi_3555	0.58	+0.5
3,739,845	-		Dshi_3555	0.61	-0.6
3,739,852	+		Dshi_3555	0.64	-0.0
3,739,854	+		Dshi_3555	0.65	-2.8
3,739,859	+		Dshi_3555	0.67	-0.2
3,739,862	-		Dshi_3555	0.68	-0.0
3,739,867	-		Dshi_3555	0.70	-0.2
3,739,867	-		Dshi_3555	0.70	-1.0
3,739,949	+				-0.7
3,739,950	+				+0.5
3,739,957	-				-1.5
3,739,965	+				+0.2
3,739,973	-				+0.1
3,739,975	+				-1.4
3,739,977	-				+0.2
3,739,998	-				-1.0
3,740,077	+				-0.4
3,740,110	-				-1.6
3,740,110	-				+0.2
3,740,115	+				-0.3
3,740,123	-				-0.2
3,740,141	-				-0.7
3,740,173	+		Dshi_3556	0.12	-0.7
3,740,203	-		Dshi_3556	0.13	-0.7
3,740,204	-		Dshi_3556	0.13	-0.7
3,740,236	+		Dshi_3556	0.15	-0.8
3,740,244	-		Dshi_3556	0.16	-0.3
3,740,290	+		Dshi_3556	0.18	-0.3
3,740,291	+		Dshi_3556	0.18	-0.8
3,740,299	-		Dshi_3556	0.19	-0.2
3,740,305	+		Dshi_3556	0.19	-1.0
3,740,314	-		Dshi_3556	0.20	-0.3
3,740,318	-		Dshi_3556	0.20	-0.5
3,740,319	+		Dshi_3556	0.20	-1.8
3,740,470	+		Dshi_3556	0.28	+0.5
3,740,698	+		Dshi_3556	0.41	+1.0
3,740,840	+		Dshi_3556	0.49	-1.2
3,740,879	+		Dshi_3556	0.51	-1.3
3,740,926	-		Dshi_3556	0.54	-0.7
3,740,958	+		Dshi_3556	0.55	+1.2
3,740,999	-		Dshi_3556	0.58	+1.0
3,741,025	+		Dshi_3556	0.59	-1.5
3,741,046	+		Dshi_3556	0.60	-0.4
3,741,085	+		Dshi_3556	0.62	-0.6
3,741,253	+		Dshi_3556	0.72	-0.8
3,741,253	+		Dshi_3556	0.72	-0.3
3,741,411	-		Dshi_3556	0.81	-0.7
3,741,485	-		Dshi_3556	0.85	-1.1
3,741,496	-		Dshi_3556	0.85	-0.5
3,741,509	-		Dshi_3556	0.86	-0.9
3,741,517	+		Dshi_3556	0.87	-0.6
3,741,752	+				-0.3
3,741,930	+				+0.8
3,741,932	+				-0.6
3,741,991	-				-1.3
3,742,001	-				-0.9
3,742,047	-				-0.2
3,742,126	-		Dshi_3557	0.13	+0.5
3,742,273	+		Dshi_3557	0.21	+0.3
3,742,421	-		Dshi_3557	0.30	+0.4
3,742,620	+		Dshi_3557	0.41	-1.4
3,742,642	+		Dshi_3557	0.42	-0.4
3,742,738	-		Dshi_3557	0.47	-0.6