Experiment: m.b. Phosphomycin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3548 and Dshi_3549 are separated by 92 nucleotides Dshi_3549 and Dshi_3550 are separated by 166 nucleotides Dshi_3550 and Dshi_3551 are separated by 64 nucleotides
Dshi_3548: Dshi_3548 - ABC transporter related (RefSeq), at 3,729,973 to 3,731,778
_3548
Dshi_3549: Dshi_3549 - glycerophosphoryl diester phosphodiesterase (RefSeq), at 3,731,871 to 3,733,085
_3549
Dshi_3550: Dshi_3550 - ubiquinone biosynthesis O-methyltransferase (RefSeq), at 3,733,252 to 3,733,998
_3550
Dshi_3551: Dshi_3551 - proline iminopeptidase (RefSeq), at 3,734,063 to 3,735,049
_3551
Position (kb)
3731
3732
3733
3734 Strain fitness (log2 ratio)
-2
-1
0
1 at 3731.832 kb on + strand at 3731.861 kb on - strand at 3731.862 kb on + strand at 3731.869 kb on + strand at 3731.914 kb on + strand at 3732.032 kb on + strand, within Dshi_3549 at 3732.096 kb on - strand, within Dshi_3549 at 3732.239 kb on - strand, within Dshi_3549 at 3732.299 kb on - strand, within Dshi_3549 at 3732.329 kb on - strand, within Dshi_3549 at 3732.462 kb on - strand, within Dshi_3549 at 3732.473 kb on + strand, within Dshi_3549 at 3732.494 kb on + strand, within Dshi_3549 at 3732.539 kb on - strand, within Dshi_3549 at 3732.547 kb on + strand at 3732.555 kb on - strand, within Dshi_3549 at 3732.589 kb on - strand, within Dshi_3549 at 3732.647 kb on + strand, within Dshi_3549 at 3732.785 kb on - strand, within Dshi_3549 at 3732.785 kb on - strand, within Dshi_3549 at 3732.802 kb on + strand, within Dshi_3549 at 3732.882 kb on - strand, within Dshi_3549 at 3732.934 kb on + strand, within Dshi_3549 at 3732.942 kb on - strand, within Dshi_3549 at 3733.181 kb on - strand at 3733.203 kb on - strand at 3733.280 kb on - strand at 3733.979 kb on + strand at 3734.031 kb on - strand at 3734.050 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 0.005 mg/ml remove 3,731,832 + +0.0 3,731,861 - +0.1 3,731,862 + +0.7 3,731,869 + -0.3 3,731,914 + -0.4 3,732,032 + Dshi_3549 0.13 -1.8 3,732,096 - Dshi_3549 0.19 +0.6 3,732,239 - Dshi_3549 0.30 +0.2 3,732,299 - Dshi_3549 0.35 -1.8 3,732,329 - Dshi_3549 0.38 +0.6 3,732,462 - Dshi_3549 0.49 -1.7 3,732,473 + Dshi_3549 0.50 -0.2 3,732,494 + Dshi_3549 0.51 -0.8 3,732,539 - Dshi_3549 0.55 +0.8 3,732,547 + -1.1 3,732,555 - Dshi_3549 0.56 -0.2 3,732,589 - Dshi_3549 0.59 -0.4 3,732,647 + Dshi_3549 0.64 -0.5 3,732,785 - Dshi_3549 0.75 -0.8 3,732,785 - Dshi_3549 0.75 -0.9 3,732,802 + Dshi_3549 0.77 -0.2 3,732,882 - Dshi_3549 0.83 -1.3 3,732,934 + Dshi_3549 0.87 -0.2 3,732,942 - Dshi_3549 0.88 -1.2 3,733,181 - -0.7 3,733,203 - +0.2 3,733,280 - -1.7 3,733,979 + +0.7 3,734,031 - -0.0 3,734,050 + -0.3
Or see this region's nucleotide sequence