Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3520

Experiment: m.b. Phosphomycin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Phosphomycin 0.005 mg/ml
3,700,257	-		Dshi_3519	0.46	-0.4
3,700,284	-		Dshi_3519	0.48	+0.8
3,700,337	+		Dshi_3519	0.52	+0.1
3,700,373	+		Dshi_3519	0.54	-0.0
3,700,373	-		Dshi_3519	0.54	+0.3
3,700,382	-		Dshi_3519	0.55	+0.5
3,700,390	+		Dshi_3519	0.55	-0.3
3,700,501	-		Dshi_3519	0.63	+0.3
3,700,503	+		Dshi_3519	0.63	-1.5
3,700,615	+		Dshi_3519	0.71	+0.0
3,700,617	+		Dshi_3519	0.71	-1.5
3,700,747	+		Dshi_3519	0.80	-0.2
3,700,911	-				-0.1
3,700,912	-				+0.9
3,700,930	+				+2.2
3,700,972	-				+0.4
3,700,976	+				+1.0
3,701,005	-				-0.2
3,701,019	-				-0.8
3,701,102	-		Dshi_3520	0.18	-1.6
3,701,125	-		Dshi_3520	0.28	-1.1
3,701,180	+		Dshi_3520	0.52	-1.1
3,701,180	+		Dshi_3520	0.52	+0.2
3,701,186	-		Dshi_3520	0.55	-0.3
3,701,204	-		Dshi_3520	0.63	-0.1
3,701,279	-				+0.0
3,701,330	+				-0.5
3,701,331	-				-0.9
3,701,350	-				+0.4
3,701,430	+		Dshi_3521	0.13	+0.5
3,701,430	+		Dshi_3521	0.13	-0.2
3,701,438	-		Dshi_3521	0.19	+0.4
3,701,440	+		Dshi_3521	0.20	-0.4
3,701,440	+		Dshi_3521	0.20	-0.8
3,701,448	-		Dshi_3521	0.25	-0.2
3,701,553	+				-0.7
3,701,561	-				-0.2
3,701,561	-				+0.5
3,701,682	+		Dshi_3522	0.67	+0.2
3,701,685	-		Dshi_3522	0.69	+0.1
3,701,685	-		Dshi_3522	0.69	-0.3
3,701,685	-		Dshi_3522	0.69	-0.0
3,701,762	+				-0.4
3,701,832	+				+0.0
3,701,887	-				+0.6
3,702,074	+		Dshi_3523	0.23	+0.5
3,702,093	+		Dshi_3523	0.25	+0.4
3,702,112	+		Dshi_3523	0.27	-0.6
3,702,120	+		Dshi_3523	0.28	-0.9
3,702,125	+		Dshi_3523	0.29	-0.3
3,702,136	+		Dshi_3523	0.30	-0.6
3,702,173	-		Dshi_3523	0.35	-0.5
3,702,244	-		Dshi_3523	0.43	+0.5
3,702,268	+		Dshi_3523	0.46	+0.3