Experiment: m.b. Phosphomycin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2974 and Dshi_2975 are separated by 4 nucleotides Dshi_2975 and Dshi_2976 overlap by 4 nucleotides
Dshi_2974: Dshi_2974 - UBA/THIF-type NAD/FAD binding protein (RefSeq), at 3,141,645 to 3,142,685
_2974
Dshi_2975: Dshi_2975 - deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (RefSeq), at 3,142,690 to 3,143,157
_2975
Dshi_2976: Dshi_2976 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (RefSeq), at 3,143,154 to 3,144,347
_2976
Position (kb)
3142
3143
3144 Strain fitness (log2 ratio)
-1
0
1 at 3141.726 kb on - strand at 3141.830 kb on + strand, within Dshi_2974 at 3141.843 kb on - strand, within Dshi_2974 at 3141.907 kb on + strand, within Dshi_2974 at 3141.915 kb on - strand, within Dshi_2974 at 3141.924 kb on - strand, within Dshi_2974 at 3141.954 kb on + strand, within Dshi_2974 at 3141.967 kb on + strand, within Dshi_2974 at 3141.993 kb on - strand, within Dshi_2974 at 3141.995 kb on + strand, within Dshi_2974 at 3141.995 kb on + strand, within Dshi_2974 at 3142.062 kb on + strand, within Dshi_2974 at 3142.210 kb on - strand, within Dshi_2974 at 3142.263 kb on - strand, within Dshi_2974 at 3142.275 kb on + strand, within Dshi_2974 at 3142.309 kb on + strand, within Dshi_2974 at 3142.471 kb on + strand, within Dshi_2974 at 3142.585 kb on + strand at 3142.626 kb on - strand at 3142.700 kb on - strand at 3142.745 kb on - strand, within Dshi_2975 at 3142.905 kb on + strand, within Dshi_2975 at 3142.991 kb on - strand, within Dshi_2975
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 0.005 mg/ml remove 3,141,726 - -0.9 3,141,830 + Dshi_2974 0.18 +0.6 3,141,843 - Dshi_2974 0.19 -1.6 3,141,907 + Dshi_2974 0.25 -0.1 3,141,915 - Dshi_2974 0.26 +0.2 3,141,924 - Dshi_2974 0.27 +0.6 3,141,954 + Dshi_2974 0.30 +0.2 3,141,967 + Dshi_2974 0.31 -1.0 3,141,993 - Dshi_2974 0.33 -0.3 3,141,995 + Dshi_2974 0.34 -0.1 3,141,995 + Dshi_2974 0.34 -1.1 3,142,062 + Dshi_2974 0.40 +0.2 3,142,210 - Dshi_2974 0.54 -0.9 3,142,263 - Dshi_2974 0.59 -0.2 3,142,275 + Dshi_2974 0.61 -0.8 3,142,309 + Dshi_2974 0.64 -0.4 3,142,471 + Dshi_2974 0.79 -0.7 3,142,585 + +0.2 3,142,626 - -0.0 3,142,700 - -0.5 3,142,745 - Dshi_2975 0.12 +0.1 3,142,905 + Dshi_2975 0.46 -0.5 3,142,991 - Dshi_2975 0.64 -1.2
Or see this region's nucleotide sequence