Experiment: m.b. Phosphomycin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2656 and Dshi_2657 are separated by 93 nucleotides Dshi_2657 and Dshi_2658 are separated by 177 nucleotides Dshi_2658 and Dshi_2659 are separated by 48 nucleotides
Dshi_2656: Dshi_2656 - sulfate adenylyltransferase (RefSeq), at 2,811,577 to 2,813,652
_2656
Dshi_2657: Dshi_2657 - hypothetical protein (RefSeq), at 2,813,746 to 2,814,336
_2657
Dshi_2658: Dshi_2658 - molybdopterin dehydrogenase FAD-binding (RefSeq), at 2,814,514 to 2,815,302
_2658
Dshi_2659: Dshi_2659 - aldehyde oxidase and xanthine dehydrogenase molybdopterin binding (RefSeq), at 2,815,351 to 2,817,726
_2659
Position (kb)
2814
2815
2816 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2813.654 kb on - strand at 2813.880 kb on - strand, within Dshi_2657 at 2813.880 kb on - strand, within Dshi_2657 at 2813.965 kb on - strand, within Dshi_2657 at 2814.022 kb on - strand, within Dshi_2657 at 2814.050 kb on - strand, within Dshi_2657 at 2814.086 kb on + strand, within Dshi_2657 at 2814.103 kb on - strand, within Dshi_2657 at 2814.149 kb on + strand, within Dshi_2657 at 2814.151 kb on + strand, within Dshi_2657 at 2814.157 kb on - strand, within Dshi_2657 at 2814.377 kb on + strand at 2814.422 kb on - strand at 2814.423 kb on - strand at 2814.427 kb on - strand at 2814.428 kb on - strand at 2814.456 kb on - strand at 2814.520 kb on - strand at 2814.545 kb on + strand at 2814.550 kb on + strand at 2814.553 kb on - strand at 2814.926 kb on - strand, within Dshi_2658 at 2814.954 kb on - strand, within Dshi_2658 at 2815.109 kb on + strand, within Dshi_2658 at 2815.121 kb on - strand, within Dshi_2658 at 2815.322 kb on - strand at 2815.345 kb on - strand at 2815.365 kb on - strand at 2815.422 kb on + strand at 2815.500 kb on + strand at 2815.523 kb on - strand at 2815.550 kb on + strand at 2815.585 kb on + strand at 2815.612 kb on - strand, within Dshi_2659 at 2815.671 kb on - strand, within Dshi_2659 at 2815.759 kb on - strand, within Dshi_2659 at 2815.799 kb on - strand, within Dshi_2659 at 2815.853 kb on - strand, within Dshi_2659 at 2816.207 kb on - strand, within Dshi_2659
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 0.005 mg/ml remove 2,813,654 - +1.0 2,813,880 - Dshi_2657 0.23 -1.3 2,813,880 - Dshi_2657 0.23 -0.2 2,813,965 - Dshi_2657 0.37 -1.0 2,814,022 - Dshi_2657 0.47 -1.2 2,814,050 - Dshi_2657 0.51 -1.9 2,814,086 + Dshi_2657 0.58 -0.9 2,814,103 - Dshi_2657 0.60 -0.9 2,814,149 + Dshi_2657 0.68 -0.3 2,814,151 + Dshi_2657 0.69 -1.5 2,814,157 - Dshi_2657 0.70 -3.0 2,814,377 + +1.6 2,814,422 - -0.2 2,814,423 - +0.0 2,814,427 - -0.7 2,814,428 - -0.3 2,814,456 - -0.2 2,814,520 - -0.1 2,814,545 + +0.2 2,814,550 + +0.3 2,814,553 - -0.0 2,814,926 - Dshi_2658 0.52 -0.4 2,814,954 - Dshi_2658 0.56 +0.1 2,815,109 + Dshi_2658 0.75 +0.1 2,815,121 - Dshi_2658 0.77 +0.6 2,815,322 - +0.9 2,815,345 - +0.4 2,815,365 - -0.2 2,815,422 + -0.0 2,815,500 + -0.6 2,815,523 - -0.6 2,815,550 + -0.3 2,815,585 + +0.2 2,815,612 - Dshi_2659 0.11 -0.5 2,815,671 - Dshi_2659 0.13 -0.1 2,815,759 - Dshi_2659 0.17 -1.2 2,815,799 - Dshi_2659 0.19 -0.6 2,815,853 - Dshi_2659 0.21 -0.8 2,816,207 - Dshi_2659 0.36 -0.8
Or see this region's nucleotide sequence