Experiment: m.b. Phosphomycin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1765 and Dshi_1766 are separated by 53 nucleotides Dshi_1766 and Dshi_1767 are separated by 150 nucleotides Dshi_1767 and Dshi_1768 are separated by 181 nucleotides
Dshi_1765: Dshi_1765 - ABC transporter related (RefSeq), at 1,830,691 to 1,832,526
_1765
Dshi_1766: Dshi_1766 - peptidoglycan-binding LysM (RefSeq), at 1,832,580 to 1,834,175
_1766
Dshi_1767: Dshi_1767 - hypothetical protein (RefSeq), at 1,834,326 to 1,834,865
_1767
Dshi_1768: Dshi_1768 - 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (RefSeq), at 1,835,047 to 1,835,688
_1768
Position (kb)
1832
1833
1834
1835 Strain fitness (log2 ratio)
-2
-1
0
1 at 1831.629 kb on - strand, within Dshi_1765 at 1831.674 kb on + strand, within Dshi_1765 at 1831.675 kb on + strand, within Dshi_1765 at 1831.687 kb on - strand, within Dshi_1765 at 1831.753 kb on + strand, within Dshi_1765 at 1831.834 kb on + strand, within Dshi_1765 at 1831.933 kb on - strand, within Dshi_1765 at 1831.978 kb on - strand, within Dshi_1765 at 1832.007 kb on + strand, within Dshi_1765 at 1832.072 kb on - strand, within Dshi_1765 at 1832.082 kb on - strand, within Dshi_1765 at 1832.586 kb on - strand at 1832.717 kb on + strand at 1833.165 kb on - strand, within Dshi_1766 at 1833.175 kb on - strand, within Dshi_1766 at 1833.433 kb on - strand, within Dshi_1766 at 1834.343 kb on + strand at 1834.444 kb on + strand, within Dshi_1767 at 1834.457 kb on - strand, within Dshi_1767 at 1834.574 kb on + strand, within Dshi_1767 at 1834.643 kb on - strand, within Dshi_1767 at 1834.674 kb on + strand, within Dshi_1767 at 1834.847 kb on - strand at 1834.947 kb on - strand at 1834.947 kb on - strand at 1834.963 kb on + strand at 1834.995 kb on + strand at 1835.037 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 0.005 mg/ml remove 1,831,629 - Dshi_1765 0.51 +0.5 1,831,674 + Dshi_1765 0.54 -0.2 1,831,675 + Dshi_1765 0.54 +0.2 1,831,687 - Dshi_1765 0.54 +0.0 1,831,753 + Dshi_1765 0.58 +0.6 1,831,834 + Dshi_1765 0.62 -0.4 1,831,933 - Dshi_1765 0.68 +0.1 1,831,978 - Dshi_1765 0.70 -0.5 1,832,007 + Dshi_1765 0.72 -0.5 1,832,072 - Dshi_1765 0.75 -0.8 1,832,082 - Dshi_1765 0.76 +0.1 1,832,586 - -0.4 1,832,717 + -1.6 1,833,165 - Dshi_1766 0.37 -0.1 1,833,175 - Dshi_1766 0.37 -1.4 1,833,433 - Dshi_1766 0.53 -0.1 1,834,343 + +0.3 1,834,444 + Dshi_1767 0.22 -1.0 1,834,457 - Dshi_1767 0.24 -2.3 1,834,574 + Dshi_1767 0.46 -0.3 1,834,643 - Dshi_1767 0.59 -0.1 1,834,674 + Dshi_1767 0.64 -0.1 1,834,847 - +0.2 1,834,947 - +0.0 1,834,947 - +1.0 1,834,963 + -0.4 1,834,995 + -1.3 1,835,037 - +0.5
Or see this region's nucleotide sequence