Experiment: m.b. Phosphomycin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1729 and Dshi_1730 are separated by 43 nucleotides Dshi_1730 and Dshi_1731 are separated by 62 nucleotides Dshi_1731 and Dshi_1732 are separated by 254 nucleotides
Dshi_1729: Dshi_1729 - putative deoxyguanosinetriphosphate triphosphohydrolase (RefSeq), at 1,796,409 to 1,797,608
_1729
Dshi_1730: Dshi_1730 - iron-sulfur cluster assembly accessory protein (RefSeq), at 1,797,652 to 1,797,984
_1730
Dshi_1731: Dshi_1731 - hypothetical protein (RefSeq), at 1,798,047 to 1,798,658
_1731
Dshi_1732: Dshi_1732 - modification methylase, HemK family (RefSeq), at 1,798,913 to 1,799,737
_1732
Position (kb)
1798
1799 Strain fitness (log2 ratio)
-2
-1
0
1 at 1797.077 kb on - strand, within Dshi_1729 at 1797.130 kb on - strand, within Dshi_1729 at 1797.151 kb on - strand, within Dshi_1729 at 1797.260 kb on - strand, within Dshi_1729 at 1797.307 kb on + strand, within Dshi_1729 at 1797.317 kb on + strand, within Dshi_1729 at 1797.358 kb on + strand, within Dshi_1729 at 1797.358 kb on + strand, within Dshi_1729 at 1797.368 kb on + strand, within Dshi_1729 at 1797.437 kb on - strand, within Dshi_1729 at 1798.281 kb on - strand, within Dshi_1731
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 0.005 mg/ml remove 1,797,077 - Dshi_1729 0.56 +0.7 1,797,130 - Dshi_1729 0.60 +0.0 1,797,151 - Dshi_1729 0.62 +0.2 1,797,260 - Dshi_1729 0.71 +0.4 1,797,307 + Dshi_1729 0.75 -2.3 1,797,317 + Dshi_1729 0.76 -0.3 1,797,358 + Dshi_1729 0.79 -1.6 1,797,358 + Dshi_1729 0.79 -0.0 1,797,368 + Dshi_1729 0.80 +0.1 1,797,437 - Dshi_1729 0.86 +0.4 1,798,281 - Dshi_1731 0.38 +1.3
Or see this region's nucleotide sequence