Experiment: m.b. Phosphomycin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1724 and Dshi_1725 overlap by 1 nucleotides Dshi_1725 and Dshi_1726 are separated by 22 nucleotides Dshi_1726 and Dshi_1727 are separated by 9 nucleotides
Dshi_1724: Dshi_1724 - segregation and condensation protein B (RefSeq), at 1,791,066 to 1,791,755
_1724
Dshi_1725: Dshi_1725 - chromosome segregation and condensation protein ScpA (RefSeq), at 1,791,755 to 1,792,549
_1725
Dshi_1726: Dshi_1726 - Beta-N-acetylhexosaminidase (RefSeq), at 1,792,572 to 1,793,558
_1726
Dshi_1727: Dshi_1727 - Sporulation domain protein (RefSeq), at 1,793,568 to 1,794,512
_1727
Position (kb)
1792
1793
1794 Strain fitness (log2 ratio)
-2
-1
0
1 at 1791.794 kb on - strand at 1792.108 kb on - strand, within Dshi_1725 at 1792.396 kb on - strand, within Dshi_1725 at 1792.647 kb on - strand at 1792.805 kb on + strand, within Dshi_1726 at 1792.933 kb on + strand, within Dshi_1726 at 1793.122 kb on - strand, within Dshi_1726 at 1793.505 kb on + strand at 1793.587 kb on - strand at 1793.931 kb on - strand, within Dshi_1727 at 1793.966 kb on + strand, within Dshi_1727 at 1794.063 kb on + strand, within Dshi_1727
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 0.005 mg/ml remove 1,791,794 - -0.4 1,792,108 - Dshi_1725 0.44 +0.2 1,792,396 - Dshi_1725 0.81 -0.4 1,792,647 - -0.7 1,792,805 + Dshi_1726 0.24 -1.9 1,792,933 + Dshi_1726 0.37 -1.0 1,793,122 - Dshi_1726 0.56 -0.6 1,793,505 + +1.0 1,793,587 - -1.0 1,793,931 - Dshi_1727 0.38 -1.0 1,793,966 + Dshi_1727 0.42 -0.3 1,794,063 + Dshi_1727 0.52 -1.0
Or see this region's nucleotide sequence