Experiment: m.b. Phosphomycin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1572 and Dshi_1573 overlap by 4 nucleotides Dshi_1573 and Dshi_1574 are separated by 61 nucleotides
Dshi_1572: Dshi_1572 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 1,637,185 to 1,638,600
_1572
Dshi_1573: Dshi_1573 - multi-sensor signal transduction histidine kinase (RefSeq), at 1,638,597 to 1,640,900
_1573
Dshi_1574: Dshi_1574 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 1,640,962 to 1,642,326
_1574
Position (kb)
1638
1639
1640
1641 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1638.841 kb on + strand, within Dshi_1573 at 1638.936 kb on + strand, within Dshi_1573 at 1639.407 kb on + strand, within Dshi_1573 at 1639.618 kb on + strand, within Dshi_1573 at 1639.703 kb on - strand, within Dshi_1573 at 1639.948 kb on + strand, within Dshi_1573 at 1639.995 kb on - strand, within Dshi_1573 at 1640.813 kb on + strand at 1640.846 kb on + strand at 1640.939 kb on - strand at 1641.035 kb on + strand at 1641.086 kb on - strand at 1641.103 kb on + strand, within Dshi_1574 at 1641.137 kb on - strand, within Dshi_1574 at 1641.702 kb on - strand, within Dshi_1574 at 1641.810 kb on - strand, within Dshi_1574 at 1641.810 kb on - strand, within Dshi_1574 at 1641.894 kb on - strand, within Dshi_1574
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 0.005 mg/ml remove 1,638,841 + Dshi_1573 0.11 -0.6 1,638,936 + Dshi_1573 0.15 -0.6 1,639,407 + Dshi_1573 0.35 -1.7 1,639,618 + Dshi_1573 0.44 -1.7 1,639,703 - Dshi_1573 0.48 -0.8 1,639,948 + Dshi_1573 0.59 -1.7 1,639,995 - Dshi_1573 0.61 -3.4 1,640,813 + -0.8 1,640,846 + -2.3 1,640,939 - -1.2 1,641,035 + -0.2 1,641,086 - -0.2 1,641,103 + Dshi_1574 0.10 -0.3 1,641,137 - Dshi_1574 0.13 -0.5 1,641,702 - Dshi_1574 0.54 +0.4 1,641,810 - Dshi_1574 0.62 -0.6 1,641,810 - Dshi_1574 0.62 -0.2 1,641,894 - Dshi_1574 0.68 +0.4
Or see this region's nucleotide sequence